Detail information of GWHGAAEX001853/evm.TU.scaffold_112.122


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428227041|ref|YP_007111138.1|3.00E-30TrkA-N domain-containing protein [Geitlerinema sp. PCC 7407]
nrgi|115456529|ref|NP_001051865.1|7.25E-153Os03g0843600 [Oryza sativa Japonica Group]
Swissprottr|Q75LD5|CASTO_ORYSJ3.00E-155Probable ion channel CASTOR
trEMBLtr|Q10AR8|Q10AR8_ORYSJ3.00E-153cDNA clone:J013149P17, full insert sequence {ECO:0000313|EMBL:BAG90805.1}
TAIRAT5G499607.00E-110Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011326669992671014-
Transcript Sequence

Network for GWHGAAEX001853

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms52.440
SRR2545915Juvenile tuber39.840
SRP108465SRR5643513five period of Gastrodia elata25.310
SRR5643514five period of Gastrodia elata28.250
SRR5643515five period of Gastrodia elata24.470
SRR5643524five period of Gastrodia elata22.510
SRR5643525five period of Gastrodia elata46.900
SRR5643528five period of Gastrodia elata27.850
SRR5643658five period of Gastrodia elata38.730
SRR5643659five period of Gastrodia elata27.800
SRR5643660five period of Gastrodia elata29.680
SRR5643661five period of Gastrodia elata26.710
SRR5643662five period of Gastrodia elata22.340
SRR5643663five period of Gastrodia elata21.780
SRR5643664five period of Gastrodia elata22.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_152.190
SRR6049655Rhizomagastrodiae_C368-T10_good_130.530
SRR6049656Rhizomagastrodiae_C368-T07_good_136.230
SRR6049657Rhizomagastrodiae_C368-T07_good_158.120
SRR6049658Rhizomagastrodiae_C368-T04_good_160.290
SRR6049659Rhizomagastrodiae_C368-T04_good_159.770
SRR6049660Rhizomagastrodiae_C368-T01_good_146.540
SRR6049661Rhizomagastrodiae_C368-T04_good_149.920
SRR6049662Rhizomagastrodiae_C368-T01_good_128.830
SRR6049663Rhizomagastrodiae_C368-T01_good_134.000
SRR6049664Rhizomagastrodiae_C368-T10_good_125.310
SRR6049665Rhizomagastrodiae_C368-T10_good_125.310
SRP279888GastroGastrodia elata tuber 57.02
JuvenJuvenile tuber57.53
Mother_GastroMother tuber of Gastrodia elata 77.02
Mother_JuvenMother tuber of Juvenile 68.49