Detail information of GWHGAAEX001855/evm.TU.scaffold_112.124


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695045875|ref|XP_009410741.1|7.69E-28PREDICTED: probable ion channel CASTOR isoform X2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q75LD5|CASTO_ORYSJ1.00E-09Probable ion channel CASTOR
trEMBLtr|F6HB27|F6HB27_VITVI5.00E-21Putative uncharacterized protein {ECO:0000313|EMBL:CCB49396.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011327067752709756-
Transcript Sequence

Network for GWHGAAEX001855

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.510
SRR2545915Juvenile tuber44.550
SRP108465SRR5643513five period of Gastrodia elata22.350
SRR5643514five period of Gastrodia elata25.630
SRR5643515five period of Gastrodia elata20.810
SRR5643524five period of Gastrodia elata21.380
SRR5643525five period of Gastrodia elata35.530
SRR5643528five period of Gastrodia elata19.700
SRR5643658five period of Gastrodia elata29.510
SRR5643659five period of Gastrodia elata30.180
SRR5643660five period of Gastrodia elata34.620
SRR5643661five period of Gastrodia elata24.750
SRR5643662five period of Gastrodia elata17.650
SRR5643663five period of Gastrodia elata20.110
SRR5643664five period of Gastrodia elata30.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_160.940
SRR6049655Rhizomagastrodiae_C368-T10_good_153.350
SRR6049656Rhizomagastrodiae_C368-T07_good_144.280
SRR6049657Rhizomagastrodiae_C368-T07_good_175.390
SRR6049658Rhizomagastrodiae_C368-T04_good_164.240
SRR6049659Rhizomagastrodiae_C368-T04_good_177.770
SRR6049660Rhizomagastrodiae_C368-T01_good_163.350
SRR6049661Rhizomagastrodiae_C368-T04_good_162.940
SRR6049662Rhizomagastrodiae_C368-T01_good_136.080
SRR6049663Rhizomagastrodiae_C368-T01_good_145.100
SRR6049664Rhizomagastrodiae_C368-T10_good_128.580
SRR6049665Rhizomagastrodiae_C368-T10_good_128.580
SRP279888GastroGastrodia elata tuber 35.27
JuvenJuvenile tuber34.74
Mother_GastroMother tuber of Gastrodia elata 35.82
Mother_JuvenMother tuber of Juvenile 47.93