Detail information of GWHGAAEX001863/evm.TU.scaffold_112.134


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392381699|ref|YP_005030896.1|6.00E-51putative Electron transport protein (SCO1/SenC/PrrC-like) [Azospirillum brasilense Sp245]
KOGKOG27927.00E-119Putative cytochrome C oxidase assembly protein
nrgi|743881306|ref|XP_010908866.1|2.57E-142PREDICTED: protein SCO1 homolog 1, mitochondrial isoform X1 [Elaeis guineensis]
Swissprottr|Q8VYP0|SCO11_ARATH5.00E-119Protein SCO1 homolog 1, mitochondrial (Precursor)
trEMBLtr|M0TXP4|M0TXP4_MUSAM2.00E-131Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P05350_001}
TAIRAT3G089507.00E-119electron transport SCO1/SenC family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011328175292848504+
Transcript Sequence

Network for GWHGAAEX001863

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02630.13SCO1-SenC822661.10E-51
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006878Biological Processcellular copper ion homeostasis
GO:0006825Biological Processcopper ion transport
GO:0008535Biological Processrespiratory chain complex IV assembly
GO:0045454Biological Processcell redox homeostasis
GO:0005507Molecular Functioncopper ion binding
GO:0005743Cellular Componentmitochondrial inner membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.660
SRR2545915Juvenile tuber49.340
SRP108465SRR5643513five period of Gastrodia elata50.130
SRR5643514five period of Gastrodia elata43.650
SRR5643515five period of Gastrodia elata52.930
SRR5643524five period of Gastrodia elata46.410
SRR5643525five period of Gastrodia elata68.890
SRR5643528five period of Gastrodia elata72.860
SRR5643658five period of Gastrodia elata67.470
SRR5643659five period of Gastrodia elata60.090
SRR5643660five period of Gastrodia elata73.690
SRR5643661five period of Gastrodia elata68.000
SRR5643662five period of Gastrodia elata68.130
SRR5643663five period of Gastrodia elata83.830
SRR5643664five period of Gastrodia elata80.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.150
SRR6049655Rhizomagastrodiae_C368-T10_good_158.510
SRR6049656Rhizomagastrodiae_C368-T07_good_133.710
SRR6049657Rhizomagastrodiae_C368-T07_good_138.470
SRR6049658Rhizomagastrodiae_C368-T04_good_125.290
SRR6049659Rhizomagastrodiae_C368-T04_good_122.930
SRR6049660Rhizomagastrodiae_C368-T01_good_129.540
SRR6049661Rhizomagastrodiae_C368-T04_good_125.490
SRR6049662Rhizomagastrodiae_C368-T01_good_125.310
SRR6049663Rhizomagastrodiae_C368-T01_good_121.170
SRR6049664Rhizomagastrodiae_C368-T10_good_148.760
SRR6049665Rhizomagastrodiae_C368-T10_good_148.760
SRP279888GastroGastrodia elata tuber 83.37
JuvenJuvenile tuber77.55
Mother_GastroMother tuber of Gastrodia elata 48.17
Mother_JuvenMother tuber of Juvenile 70.83