Detail information of GWHGAAEX001864/evm.TU.scaffold_112.133
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG3893 | 4.00E-84 | Mannosyltransferase |
| nr | gi|672174045|ref|XP_008807166.1| | 0 | PREDICTED: GPI mannosyltransferase 1 isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q500W7|PIGM_ARATH | 0 | GPI mannosyltransferase 1 |
| trEMBL | tr|I1ISX4|I1ISX4_BRADI | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI4G38200.1} |
| TAIR | HS21553315 | 4.00E-84 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000113 | 2818291 | 2819625 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001864
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module6 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05007.12 | Mannosyl_trans | 128 | 419 | 2.30E-68 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT50 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05284 | PIGM | Metabolic pathways | map01100 |
| Glycosylphosphatidylinositol (GPI)-anchor biosynthesis | map00563 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006506 | Biological Process | GPI anchor biosynthetic process |
| GO:0016758 | Molecular Function | transferase activity, transferring hexosyl groups |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 39.570 |
| SRR2545915 | Juvenile tuber | 21.070 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 6.420 |
| SRR5643514 | five period of Gastrodia elata | 4.890 | |
| SRR5643515 | five period of Gastrodia elata | 5.920 | |
| SRR5643524 | five period of Gastrodia elata | 5.580 | |
| SRR5643525 | five period of Gastrodia elata | 11.200 | |
| SRR5643528 | five period of Gastrodia elata | 6.800 | |
| SRR5643658 | five period of Gastrodia elata | 9.380 | |
| SRR5643659 | five period of Gastrodia elata | 7.820 | |
| SRR5643660 | five period of Gastrodia elata | 8.180 | |
| SRR5643661 | five period of Gastrodia elata | 6.670 | |
| SRR5643662 | five period of Gastrodia elata | 8.460 | |
| SRR5643663 | five period of Gastrodia elata | 8.240 | |
| SRR5643664 | five period of Gastrodia elata | 6.450 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 16.940 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 16.590 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 17.910 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 24.960 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 27.350 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 35.830 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 22.400 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 28.230 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 11.940 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 17.360 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 10.040 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 10.040 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 12.76 |
| Juven | Juvenile tuber | 8.38 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 10.70 | |
| Mother_Juven | Mother tuber of Juvenile | 6.28 |