Gene detail

Detail information of GWHGAAEX001875/evm.TU.scaffold_112.145

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG2088	Predicted lipase/calmodulin-binding heat-shock protein
nr	gi\|743814779\|ref\|XP_010930153.1\|	PREDICTED: uncharacterized protein LOC105051408 isoform X1 [Elaeis guineensis]
trEMBL	tr\|M0T1N5\|M0T1N5_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P25600_001}
TAIR	AT1G05790	lipase class 3 family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000113	3092811	3120158	-

Transcript Sequence
>GWHTAAEX001875 TCATTTCTGAAGACCTGCGCATTTGTGAGGATGTCAGGTGTGGTACCGACGGCGTCATCAAATTTGTTCGAACCCAGCAGATCCTGCCCCGATCTCAATGGCGGAAGGGTTCTTCGCTGATTTACAAATAGAGTAACGTACTTGTTGCGTTCGTCATTCTCTCTGATAGTCGATGCGAGCTCAATACCGGATGCCAGGCCTTATTTTCTTTGTTGGTGACGAATGAGTGACTCAGCAACGGACAGTTCCCCCATTGCATCGAAGCTGAGAACCTTGCGATGGGTGTCGATGTTGTTAGGGCTTTCGAATCTGAGCATCTTCATGATCGGCGCCTTCCTTATGGTCTCCGTCTCCCCGATGTGCTCCGGCAGCGATGTTTTTTGCGTCGGCTTTATCGCGCTCATCGCCTGCATCCGAATTATCTGTATGTTGACCGTGGCCAAGGCGCAACAGGACACGGCCGCCACCATTGTTGGCAATTCCATGTACGCCGATTTCCCCATTGATGCCTCAGAGAGTCGAATCGATCGACAGAGGCAATATAGGCGATGGCTTTGGTGGAGCAGGCTTGGAATGTTGATCAATACTTTGCAGCTGTTTATGGCGCTTTATCTGATGTACATCGTAGTTAAAAATCTTTCTCAACAAGGGGCAGGCTCCACCGTTTGCTTTCTAGGGCATGAGATGAAAGATGCTGAATGGACAAAGCTCTTTATGGTTTCTTTTTTTGTTCTTACGTGGCTTGTGGCCATCGTCCAATGTCTAACTGGATCTGATGTTTTAAGATGGAGAGCATTCTATGCGGCACGTGATGCAGCTTGGAGAGCTCACTACATTGAAGTGTTTGATTATGGAATTCGAGAAGCTTTATGCTGCCTAGGACGTGTCAAATACCTGAGCGTCTTGGAAGAAGATGAGGTTTATTCTGTTGCAACGCTATTGGGTGATCTCGTGGCATACAGAGCAACAGGCACTGGACATCTGGAAGTCTTGGCAGGGCTTGCTCTTTCACAGAGTCATAAACATTCTCTAGCATCGTGCAATGAATCTATTGAAGTGCCCGACACTCGACTAGAAGAGGCTACTCTCTTTCATCAATTTGCTGAAGCTGCATACACAGGTCCCTTGCTTGATTTTGGAAGGAATCCTGTACTATTTCTTTTTTGGTGGCTTTACAGACAAGGAGTTCTAACTTCTTGGGCTCGCAAAAGGTGTCCCATACTTGAAGGCGACAACTGGTGGAGAGGACATGCTGCAGCATTTTTAAATTATGTTAATTTGCCCCCAGGCGTTCTTCGGCGTGGTCGTGTTTGCCAAAAAAATCGAGAGGTGTCCTACTTTGTTGTGGCTCTTCATGATGTAAGAACCGTTGTGATTGCTATACGAGGTACAGAGACTCCTGAAGACCTCATAACTGATGGCCTATGTAGAGAGTGCTACCTGTCTGATGATGATTTGTATGGTTTGATCAATTGCGATGGATTGTTTTCAAATACGAGGGAAACTGCTGCTTCGTTATTTTCGCACTATGGACATTCGGGAATTGTTGAATCTGCTAGAGAGCTTTACATGCACGTTGATGGCCGGCCGGAAGTTTGTGTAGAAACAAGCACATTTGAATCTACGGGATTTCTTACTTCATTGATGGGCAGCGGCTGTGAATGTGATGGGTATAAATTACGTATTGTTGGACATTCCTTGGGAGGCTCTGTTGCCTCATTGCTTGGGCTGAGGTTGAAAGGAAGATATCCGAGCTTGCATGTGTATGCGTATGGACCGCTTCCTTGCATTGACACAGCGACAGCGGAGGCATGCTCAGACTTTGTCACTACGATTGTTCACAATGATGAGTTTTCTTCGCGGCTCTCTGTCAATTCTATTATCAGGCTTCGTGCTGCAGCAATAAGGGTTCTCTCTGATGATTCTTCGGCTAACTCTGCATTGATTAATAAATTTGCCCGAAAAATCCTGAAATTGAGGAAGCAATTCGAAACTGGGGAAAAGTCTGAAATTATCGTGCCGGAATCATTAGTTTCTGGCAGATGTAGTCCTTGCTCATCAGCTTTGCAGACCGGCCAATACTGCAGCGGCTTGCCGATATATGATTGCTCATCATCTGAATGTGAAATTGAACGGCCATTGTATGATGACAATTTTAACTCAAACTTTTCTCCAGCTGCTGCTGCTGGTGATGTTGAAGCTCAGCTGGGCGGAGTGACCTGCGAATTGAAGGAGGTGTTTCTGCCGGGTTTGGTCATTCATATCGTTCCCCGGCGGATGAATAATATTTCAGATAAGTGGAAGAGCTGTGCGGGCGACGACAGGGAGGGCGGGTACAGGGCGATTGTGTCGAGGAGGGAGAATTTCAAGGATATAATTGTATCCCCGGGCATGTTTCTTGATCACCTGCCATGGAGATGTGCTCATGCAATGAAGGCTGCTCTTGAATGCAGTAAATCACAAGCCAAGCATAGCAGCGATTCATATTCTGGTGGGAGTATTCATCCATGCTTCTCTTAAATTATTGCTTGGGAAGTTCTTAACAGCAATTTTGCATTGTTGCTTGGCCCCATCCGCCTACAGGACAGCCTTCTGAATGCTTGGCTATACAGATGTAGGCGGTTTTTTTTTCAAGCCCGCCTATATAATCCAAGAAAGCTCGCCCTCTTAAGGGAGTGTGGGAGGAAAGAAATAAACTTCTCTAATCTGTCGTCTTCTCTCTGCCAGATCTTAGAGCCAACCAAAAAATCTACGACACGTGAGGCATTTTTTTAATTATATTTAGGCGGGTTCGGTTTGTTAGCATTGCCCCACCTAAAAGCATTTGAAAAGACTGCAGCATTCTTTTTGAGAGGCGTTGAATGCTGCGGTTTAAGGGCTATAGTATTTGGGATCCTGAGGGCCTGTATAAATTATCATTTATTTTAAAATTATTGTTATTAATTTTTGTTTAAGTTGTATAGTTCTTGTTTTTACAAGTAATTTTGAATTTATATCCTCAATTTTTTCAGAACGGCGGTTGAGAAAATTTTGAAATTTAAGTGGAC

Network for GWHGAAEX001875

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01764.24	Lipase_3	384	542	1.20E-09

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006629	Biological Process	lipid metabolic process

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.170
SRP064423	SRR2545915	Juvenile tuber	9.320
SRP108465	SRR5643513	five period of Gastrodia elata	11.100
	SRR5643514	five period of Gastrodia elata	11.770
	SRR5643515	five period of Gastrodia elata	11.440
	SRR5643524	five period of Gastrodia elata	10.090
	SRR5643525	five period of Gastrodia elata	10.060
	SRR5643528	five period of Gastrodia elata	8.070
	SRR5643658	five period of Gastrodia elata	7.500
	SRR5643659	five period of Gastrodia elata	13.490
	SRR5643660	five period of Gastrodia elata	12.540
	SRR5643661	five period of Gastrodia elata	14.160
	SRR5643662	five period of Gastrodia elata	12.850
	SRR5643663	five period of Gastrodia elata	13.100
	SRR5643664	five period of Gastrodia elata	10.660
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	12.860
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.570
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	11.650
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.820
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	10.990
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.160
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	12.060
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.140
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	13.170
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.770
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	14.240
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	14.240
SRP279888	Gastro	Gastrodia elata tuber	12.11
	Juven	Juvenile tuber	11.55
	Mother_Gastro	Mother tuber of Gastrodia elata	11.85
	Mother_Juven	Mother tuber of Juvenile	13.64