Detail information of GWHGAAEX001889/evm.TU.scaffold_113.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743832434|ref|XP_010934978.1|0PREDICTED: TATA box-binding protein-associated factor RNA polymerase I subunit B [Elaeis guineensis]
Swissprottr|Q5W770|TAF1B_ORYSJ2.00E-140TATA box-binding protein-associated factor RNA polymerase I subunit B
trEMBLtr|M0SAK2|M0SAK2_MUSAM6.00E-175Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P00340_001}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010915618981576939-
Transcript Sequence

Network for GWHGAAEX001889

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.980
SRR2545915Juvenile tuber6.820
SRP108465SRR5643513five period of Gastrodia elata7.390
SRR5643514five period of Gastrodia elata6.440
SRR5643515five period of Gastrodia elata4.500
SRR5643524five period of Gastrodia elata5.140
SRR5643525five period of Gastrodia elata9.750
SRR5643528five period of Gastrodia elata10.720
SRR5643658five period of Gastrodia elata8.130
SRR5643659five period of Gastrodia elata5.310
SRR5643660five period of Gastrodia elata6.150
SRR5643661five period of Gastrodia elata5.200
SRR5643662five period of Gastrodia elata6.430
SRR5643663five period of Gastrodia elata5.680
SRR5643664five period of Gastrodia elata7.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.710
SRR6049655Rhizomagastrodiae_C368-T10_good_112.820
SRR6049656Rhizomagastrodiae_C368-T07_good_113.980
SRR6049657Rhizomagastrodiae_C368-T07_good_111.980
SRR6049658Rhizomagastrodiae_C368-T04_good_113.470
SRR6049659Rhizomagastrodiae_C368-T04_good_112.170
SRR6049660Rhizomagastrodiae_C368-T01_good_113.190
SRR6049661Rhizomagastrodiae_C368-T04_good_113.410
SRR6049662Rhizomagastrodiae_C368-T01_good_113.900
SRR6049663Rhizomagastrodiae_C368-T01_good_113.710
SRR6049664Rhizomagastrodiae_C368-T10_good_114.310
SRR6049665Rhizomagastrodiae_C368-T10_good_114.310
SRP279888GastroGastrodia elata tuber 10.62
JuvenJuvenile tuber13.24
Mother_GastroMother tuber of Gastrodia elata 9.74
Mother_JuvenMother tuber of Juvenile 14.12