Detail information of GWHGAAEX001894/evm.TU.scaffold_113.26


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743756426|ref|XP_010916734.1|2.90E-58PREDICTED: probable WRKY transcription factor 65 [Elaeis guineensis]
Swissprottr|Q9LP56|WRK65_ARATH4.00E-50Probable WRKY transcription factor 65
trEMBLtr|W9RQF6|W9RQF6_9ROSA2.00E-54Putative WRKY transcription factor 69 {ECO:0000313|EMBL:EXB92371.1}
TAIRAT1G292802.00E-47WRKY DNA-binding protein 65

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010919688041969859+
Transcript Sequence

Network for GWHGAAEX001894

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY531098.90E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms105.380
SRR2545915Juvenile tuber39.680
SRP108465SRR5643513five period of Gastrodia elata232.890
SRR5643514five period of Gastrodia elata151.810
SRR5643515five period of Gastrodia elata103.920
SRR5643524five period of Gastrodia elata139.980
SRR5643525five period of Gastrodia elata103.820
SRR5643528five period of Gastrodia elata76.190
SRR5643658five period of Gastrodia elata92.960
SRR5643659five period of Gastrodia elata20.800
SRR5643660five period of Gastrodia elata21.740
SRR5643661five period of Gastrodia elata29.980
SRR5643662five period of Gastrodia elata40.470
SRR5643663five period of Gastrodia elata16.100
SRR5643664five period of Gastrodia elata47.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1165.460
SRR6049655Rhizomagastrodiae_C368-T10_good_1168.750
SRR6049656Rhizomagastrodiae_C368-T07_good_1161.920
SRR6049657Rhizomagastrodiae_C368-T07_good_1145.320
SRR6049658Rhizomagastrodiae_C368-T04_good_1131.290
SRR6049659Rhizomagastrodiae_C368-T04_good_1143.580
SRR6049660Rhizomagastrodiae_C368-T01_good_1113.170
SRR6049661Rhizomagastrodiae_C368-T04_good_1121.290
SRR6049662Rhizomagastrodiae_C368-T01_good_1109.210
SRR6049663Rhizomagastrodiae_C368-T01_good_1112.670
SRR6049664Rhizomagastrodiae_C368-T10_good_1235.410
SRR6049665Rhizomagastrodiae_C368-T10_good_1235.410
SRP279888GastroGastrodia elata tuber 62.93
JuvenJuvenile tuber255.37
Mother_GastroMother tuber of Gastrodia elata 529.46
Mother_JuvenMother tuber of Juvenile 502.60