Detail information of GWHGAAEX001905/evm.TU.scaffold_114.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|220922916|ref|YP_002498218.1|8.00E-842-nitropropane dioxygenase [Methylobacterium nodulans ORS 2060]
nrgi|695067879|ref|XP_009380863.1|0PREDICTED: nitronate monooxygenase [Musa acuminata subsp. malaccensis]
trEMBLtr|M0RL37|M0RL37_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P24620_001}
TAIRAT5G642504.00E-171Aldolase-type TIM barrel family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001153186470533+
Transcript Sequence

Network for GWHGAAEX001905

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03060.14NMO6722.90E-12
PF03060.14NMO753193.50E-39
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0003824Molecular Functioncatalytic activity
GO:0018580Molecular Functionnitronate monooxygenase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.500
SRR2545915Juvenile tuber37.400
SRP108465SRR5643513five period of Gastrodia elata69.300
SRR5643514five period of Gastrodia elata86.630
SRR5643515five period of Gastrodia elata68.070
SRR5643524five period of Gastrodia elata80.860
SRR5643525five period of Gastrodia elata36.140
SRR5643528five period of Gastrodia elata30.620
SRR5643658five period of Gastrodia elata31.810
SRR5643659five period of Gastrodia elata46.710
SRR5643660five period of Gastrodia elata58.710
SRR5643661five period of Gastrodia elata42.330
SRR5643662five period of Gastrodia elata42.750
SRR5643663five period of Gastrodia elata43.540
SRR5643664five period of Gastrodia elata43.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_156.340
SRR6049655Rhizomagastrodiae_C368-T10_good_145.430
SRR6049656Rhizomagastrodiae_C368-T07_good_163.040
SRR6049657Rhizomagastrodiae_C368-T07_good_159.680
SRR6049658Rhizomagastrodiae_C368-T04_good_139.070
SRR6049659Rhizomagastrodiae_C368-T04_good_138.590
SRR6049660Rhizomagastrodiae_C368-T01_good_151.430
SRR6049661Rhizomagastrodiae_C368-T04_good_145.190
SRR6049662Rhizomagastrodiae_C368-T01_good_153.230
SRR6049663Rhizomagastrodiae_C368-T01_good_143.940
SRR6049664Rhizomagastrodiae_C368-T10_good_167.800
SRR6049665Rhizomagastrodiae_C368-T10_good_167.800
SRP279888GastroGastrodia elata tuber 47.13
JuvenJuvenile tuber94.24
Mother_GastroMother tuber of Gastrodia elata 20.13
Mother_JuvenMother tuber of Juvenile 42.43