Detail information of GWHGAAEX001916/evm.TU.scaffold_114.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672176026|ref|XP_008808076.1|2.50E-59PREDICTED: uncharacterized protein LOC103720244 [Phoenix dactylifera]
trEMBLtr|M0U9G8|M0U9G8_MUSAM7.00E-56Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP15590_001}
TAIRAT2G221702.00E-47Lipase/lipooxygenase, PLAT/LH2 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000115596108597431-
Transcript Sequence

Network for GWHGAAEX001916

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01477.22PLAT421632.40E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0020037Molecular Functionheme binding
GO:0005515Molecular Functionprotein binding
GO:0004096Molecular Functioncatalase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms127.770
SRR2545915Juvenile tuber131.450
SRP108465SRR5643513five period of Gastrodia elata136.490
SRR5643514five period of Gastrodia elata103.410
SRR5643515five period of Gastrodia elata132.210
SRR5643524five period of Gastrodia elata92.610
SRR5643525five period of Gastrodia elata141.080
SRR5643528five period of Gastrodia elata138.870
SRR5643658five period of Gastrodia elata189.950
SRR5643659five period of Gastrodia elata179.710
SRR5643660five period of Gastrodia elata91.890
SRR5643661five period of Gastrodia elata176.970
SRR5643662five period of Gastrodia elata64.560
SRR5643663five period of Gastrodia elata131.400
SRR5643664five period of Gastrodia elata64.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1187.340
SRR6049655Rhizomagastrodiae_C368-T10_good_174.290
SRR6049656Rhizomagastrodiae_C368-T07_good_170.410
SRR6049657Rhizomagastrodiae_C368-T07_good_1114.300
SRR6049658Rhizomagastrodiae_C368-T04_good_16.450
SRR6049659Rhizomagastrodiae_C368-T04_good_14.650
SRR6049660Rhizomagastrodiae_C368-T01_good_124.970
SRR6049661Rhizomagastrodiae_C368-T04_good_15.910
SRR6049662Rhizomagastrodiae_C368-T01_good_124.120
SRR6049663Rhizomagastrodiae_C368-T01_good_14.760
SRR6049664Rhizomagastrodiae_C368-T10_good_1170.050
SRR6049665Rhizomagastrodiae_C368-T10_good_1170.050
SRP279888GastroGastrodia elata tuber 55.00
JuvenJuvenile tuber81.37
Mother_GastroMother tuber of Gastrodia elata 23.79
Mother_JuvenMother tuber of Juvenile 23.29