Detail information of GWHGAAEX001919/evm.TU.scaffold_114.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262198376|ref|YP_003269585.1|3.00E-60trehalose-phosphatase [Haliangium ochraceum DSM 14365]
KOGKOG10501.00E-139Trehalose-6-phosphate synthase component TPS1 and related subunits
nrgi|743849442|ref|XP_010939628.1|1.86E-166PREDICTED: probable trehalose-phosphate phosphatase 6 [Elaeis guineensis]
Swissprottr|Q6ZGP8|TPP4_ORYSJ2.00E-151Probable trehalose-phosphate phosphatase 4
trEMBLtr|F6I7F4|F6I7F4_VITVI4.00E-165Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117} (Fragment)
TAIRAT5G101001.00E-139Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000115786883789545+
Transcript Sequence

Network for GWHGAAEX001919

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02358.15Trehalose_PPase661311.40E-14
PF02358.15Trehalose_PPase1363247.20E-55
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01087otsB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005992Biological Processtrehalose biosynthetic process
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.260
SRR2545915Juvenile tuber12.740
SRP108465SRR5643513five period of Gastrodia elata1.490
SRR5643514five period of Gastrodia elata2.230
SRR5643515five period of Gastrodia elata1.210
SRR5643524five period of Gastrodia elata1.280
SRR5643525five period of Gastrodia elata77.500
SRR5643528five period of Gastrodia elata23.300
SRR5643658five period of Gastrodia elata21.130
SRR5643659five period of Gastrodia elata5.730
SRR5643660five period of Gastrodia elata5.030
SRR5643661five period of Gastrodia elata8.270
SRR5643662five period of Gastrodia elata3.430
SRR5643663five period of Gastrodia elata1.180
SRR5643664five period of Gastrodia elata2.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.030
SRR6049655Rhizomagastrodiae_C368-T10_good_12.290
SRR6049656Rhizomagastrodiae_C368-T07_good_14.590
SRR6049657Rhizomagastrodiae_C368-T07_good_13.260
SRR6049658Rhizomagastrodiae_C368-T04_good_14.190
SRR6049659Rhizomagastrodiae_C368-T04_good_13.830
SRR6049660Rhizomagastrodiae_C368-T01_good_12.870
SRR6049661Rhizomagastrodiae_C368-T04_good_16.220
SRR6049662Rhizomagastrodiae_C368-T01_good_12.440
SRR6049663Rhizomagastrodiae_C368-T01_good_11.160
SRR6049664Rhizomagastrodiae_C368-T10_good_14.140
SRR6049665Rhizomagastrodiae_C368-T10_good_14.140
SRP279888GastroGastrodia elata tuber 2.04
JuvenJuvenile tuber6.03
Mother_GastroMother tuber of Gastrodia elata 11.23
Mother_JuvenMother tuber of Juvenile 2.83