Detail information of GWHGAAEX001923/evm.TU.scaffold_114.34
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|17228945|ref|NP_485493.1| | 2.00E-30 | cytochrome P450 [Nostoc sp. PCC 7120] |
| KOG | KOG0156 | 8.00E-138 | Cytochrome P450 CYP2 subfamily |
| nr | gi|672138241|ref|XP_008792870.1| | 0 | PREDICTED: cytochrome P450 71A1-like [Phoenix dactylifera] |
| Swissprot | tr|Q9SD85|F3PH_ARATH | 2.00E-138 | Flavonoid 3'-monooxygenase |
| trEMBL | tr|M5WT87|M5WT87_PRUPE | 0 | Uncharacterized protein {ECO:0000313|EMBL:EMJ16451.1} |
| TAIR | AT5G07990 | 8.00E-138 | Cytochrome P450 superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000115 | 1100234 | 1102625 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001923
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 32 | 485 | 8.30E-98 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP75B1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K20623 | CYP92A6 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Brassinosteroid biosynthesis | map00905 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 4.620 |
| SRR2545915 | Juvenile tuber | 2.740 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.730 |
| SRR5643514 | five period of Gastrodia elata | 0.900 | |
| SRR5643515 | five period of Gastrodia elata | 2.780 | |
| SRR5643524 | five period of Gastrodia elata | 2.620 | |
| SRR5643525 | five period of Gastrodia elata | 8.520 | |
| SRR5643528 | five period of Gastrodia elata | 24.200 | |
| SRR5643658 | five period of Gastrodia elata | 4.890 | |
| SRR5643659 | five period of Gastrodia elata | 15.000 | |
| SRR5643660 | five period of Gastrodia elata | 4.620 | |
| SRR5643661 | five period of Gastrodia elata | 17.890 | |
| SRR5643662 | five period of Gastrodia elata | 13.640 | |
| SRR5643663 | five period of Gastrodia elata | 7.930 | |
| SRR5643664 | five period of Gastrodia elata | 24.090 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.060 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.870 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.470 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1.090 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.550 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.320 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.070 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 2.160 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.610 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.810 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.510 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.510 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.72 |
| Juven | Juvenile tuber | 1.62 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.25 | |
| Mother_Juven | Mother tuber of Juvenile | 24.03 |