Detail information of GWHGAAEX001924/evm.TU.scaffold_114.37


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|149980678|gb|ABR53728.1|4.87E-69DRE-binding protein DREB1 [Cymbidium insigne]
Swissprottr|O65665|ERF60_ARATH3.00E-53Ethylene-responsive transcription factor ERF060
trEMBLtr|A6YT27|A6YT27_9ASPA2.00E-69DRE-binding protein DREB1 {ECO:0000313|EMBL:ABR53728.1}
TAIRAT4G397801.00E-52Integrase-type DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011511589051160377-
Transcript Sequence

Network for GWHGAAEX001924

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP2811306.50E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.220
SRR2545915Juvenile tuber156.430
SRP108465SRR5643513five period of Gastrodia elata28.330
SRR5643514five period of Gastrodia elata19.620
SRR5643515five period of Gastrodia elata52.450
SRR5643524five period of Gastrodia elata15.870
SRR5643525five period of Gastrodia elata127.870
SRR5643528five period of Gastrodia elata145.860
SRR5643658five period of Gastrodia elata124.080
SRR5643659five period of Gastrodia elata160.280
SRR5643660five period of Gastrodia elata109.840
SRR5643661five period of Gastrodia elata212.320
SRR5643662five period of Gastrodia elata214.390
SRR5643663five period of Gastrodia elata122.280
SRR5643664five period of Gastrodia elata121.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_145.200
SRR6049655Rhizomagastrodiae_C368-T10_good_129.400
SRR6049656Rhizomagastrodiae_C368-T07_good_139.590
SRR6049657Rhizomagastrodiae_C368-T07_good_132.690
SRR6049658Rhizomagastrodiae_C368-T04_good_121.950
SRR6049659Rhizomagastrodiae_C368-T04_good_124.180
SRR6049660Rhizomagastrodiae_C368-T01_good_133.660
SRR6049661Rhizomagastrodiae_C368-T04_good_127.850
SRR6049662Rhizomagastrodiae_C368-T01_good_149.100
SRR6049663Rhizomagastrodiae_C368-T01_good_146.420
SRR6049664Rhizomagastrodiae_C368-T10_good_131.880
SRR6049665Rhizomagastrodiae_C368-T10_good_131.880
SRP279888GastroGastrodia elata tuber 66.20
JuvenJuvenile tuber15.90
Mother_GastroMother tuber of Gastrodia elata 84.15
Mother_JuvenMother tuber of Juvenile 18.64