Detail information of GWHGAAEX001929/evm.TU.scaffold_114.48_evm.TU.scaffold_114.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10430Ca2+-binding transmembrane protein LETM1/MRS7
nrgi|672135920|ref|XP_008791638.1|0PREDICTED: uncharacterized protein LOC103708479 isoform X2 [Phoenix dactylifera]
trEMBLtr|M0RIX8|M0RIX8_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P17030_001}
TAIRAT3G115600LETM1-like protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011513802171463562+
Transcript Sequence

Network for GWHGAAEX001929

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07766.12LETM17758759.70E-14
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.050
SRR2545915Juvenile tuber19.430
SRP108465SRR5643513five period of Gastrodia elata13.080
SRR5643514five period of Gastrodia elata11.680
SRR5643515five period of Gastrodia elata10.330
SRR5643524five period of Gastrodia elata11.930
SRR5643525five period of Gastrodia elata8.540
SRR5643528five period of Gastrodia elata8.470
SRR5643658five period of Gastrodia elata10.870
SRR5643659five period of Gastrodia elata11.180
SRR5643660five period of Gastrodia elata11.610
SRR5643661five period of Gastrodia elata11.110
SRR5643662five period of Gastrodia elata13.340
SRR5643663five period of Gastrodia elata14.690
SRR5643664five period of Gastrodia elata14.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.650
SRR6049655Rhizomagastrodiae_C368-T10_good_19.460
SRR6049656Rhizomagastrodiae_C368-T07_good_111.810
SRR6049657Rhizomagastrodiae_C368-T07_good_111.540
SRR6049658Rhizomagastrodiae_C368-T04_good_113.860
SRR6049659Rhizomagastrodiae_C368-T04_good_116.190
SRR6049660Rhizomagastrodiae_C368-T01_good_113.950
SRR6049661Rhizomagastrodiae_C368-T04_good_115.580
SRR6049662Rhizomagastrodiae_C368-T01_good_111.030
SRR6049663Rhizomagastrodiae_C368-T01_good_110.870
SRR6049664Rhizomagastrodiae_C368-T10_good_111.620
SRR6049665Rhizomagastrodiae_C368-T10_good_111.620
SRP279888GastroGastrodia elata tuber 18.49
JuvenJuvenile tuber22.11
Mother_GastroMother tuber of Gastrodia elata 12.00
Mother_JuvenMother tuber of Juvenile 19.14