Detail information of GWHGAAEX001940/evm.TU.scaffold_114.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|164562217|gb|ABY61023.1|7.13E-85zinc finger homeodomain protein 1 [Saruma henryi]
Swissprottr|Q6YXH5|ZHD1_ORYSJ1.00E-76Zinc-finger homeodomain protein 1
trEMBLtr|B0LK12|B0LK12_SARHE3.00E-85Zinc finger homeodomain protein 1 {ECO:0000313|EMBL:ABY61023.1}
TAIRAT4G246603.00E-63homeobox protein 22

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011519083531909343-
Transcript Sequence

Network for GWHGAAEX001940

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module14

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04770.11ZF-HD_dimer41931.30E-28
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors Familyzf-HD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.430
SRR2545915Juvenile tuber1.070
SRP108465SRR5643513five period of Gastrodia elata1.370
SRR5643514five period of Gastrodia elata3.550
SRR5643515five period of Gastrodia elata1.530
SRR5643524five period of Gastrodia elata1.580
SRR5643525five period of Gastrodia elata0.540
SRR5643528five period of Gastrodia elata0.180
SRR5643658five period of Gastrodia elata0.490
SRR5643659five period of Gastrodia elata1.710
SRR5643660five period of Gastrodia elata1.220
SRR5643661five period of Gastrodia elata2.060
SRR5643662five period of Gastrodia elata1.630
SRR5643663five period of Gastrodia elata0.680
SRR5643664five period of Gastrodia elata2.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.140
SRR6049655Rhizomagastrodiae_C368-T10_good_11.030
SRR6049656Rhizomagastrodiae_C368-T07_good_12.160
SRR6049657Rhizomagastrodiae_C368-T07_good_11.600
SRR6049658Rhizomagastrodiae_C368-T04_good_11.650
SRR6049659Rhizomagastrodiae_C368-T04_good_12.310
SRR6049660Rhizomagastrodiae_C368-T01_good_11.580
SRR6049661Rhizomagastrodiae_C368-T04_good_13.960
SRR6049662Rhizomagastrodiae_C368-T01_good_13.600
SRR6049663Rhizomagastrodiae_C368-T01_good_12.490
SRR6049664Rhizomagastrodiae_C368-T10_good_11.700
SRR6049665Rhizomagastrodiae_C368-T10_good_11.700
SRP279888GastroGastrodia elata tuber 2.37
JuvenJuvenile tuber1.03
Mother_GastroMother tuber of Gastrodia elata 6.80
Mother_JuvenMother tuber of Juvenile 1.05