Gene detail

Detail information of GWHGAAEX001944/evm.TU.scaffold_114.74

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0759	2.00E-155	Mitochondrial oxoglutarate/malate carrier proteins
nr	gi\|672181593\|ref\|XP_008811021.1\|	1.48E-179	PREDICTED: mitochondrial uncoupling protein 5 [Phoenix dactylifera]
Swissprot	tr\|Q9SB52\|PUMP4_ARATH	5.00E-156	Mitochondrial uncoupling protein 4
trEMBL	tr\|M1B5Z0\|M1B5Z0_SOLTU	1.00E-165	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400037834}
TAIR	AT4G24570	2.00E-155	dicarboxylate carrier 2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000115	2035654	2037885	+

Transcript Sequence
>GWHTAAEX001944 AAAAGTAAAAACGTTTATATTTAATTTTTTCATAGGTTAAAAATAAAAACGGAGTGGTTACAAGAGTTTGCTCGATGCGGATACAAAGCGGCCCGTTCCAATCTGGCTAATAAAATGCGAATTTACTTACATTTATTTTATATAAAATTGAGTCCTACTTTAGCGGACGCGCTTCAGGCCGTCACCAGCAAGACCATCCCTTTCCCTGTGCCTGCCGTGTAGCGGAACCTGCTTTTGTTGCCGCCAGCTTCAGCGGAGCCGTTGTGGGAGGCCAGCCAGAAAGGGCTATAAATACCTCTCCCCCCTCCCCTCCTTCCCTGCAATCCTCCGATTTATGTCTCAGAGAGCACGCGTTCCTCACTCTTCTTCCGTAGCCTTCGGCCTTCTCTCCCACCTCCTGATCTCCGGGGAGGTGAATCCCAGCCCTGATTGGTAGCGGAATCTCTATCTCTCTTTTTCCGTCTTGTTTCCCCTGATTCAGGATCGCAGGAAACTAGAAACAATGGGTCTCAAGGGTTTCGTGGAGGGCGGGATCGCATCCATCGTGGCCGGCTGCTCGACTCACCCGCTCGATCTGATCAAGGTGCGGATGCAGCTCCAGGGCGAATCGGCCGCGGTTGTCCGCCCAGCCGTCGCCTTTCCCGGATCTGCGGCGGTCATTACGCAGCCTGTTCCCGGCCCCATTTCCGTTGGCGCTCAGATACTCCGCAGCGAGGGCCCGGCCGCCCTCTTCTCCGGCATATCCGCCACAATGCTTCGCCAAACCCTCTATTCCACGACTCGGATGGGCCTCTACGACGTCCTCAAGACCAAATGGTCTTCCCCCTCGAGCGAGGCTGCGGCTCCCGTGCTTCCTCTTCACAAGAAGATCATCGCGGGGCTGATCGCGGGCGGAGTGGGAGCAGCGGTGGGAAATCCGGCGGATGTGGCTATGGTGAGGATGCAGGCGGACGGGAGGCTTCCAGCTGCCGATAGGCGGAACTACAGGGGGGTCGGCGACGCCATCACTCGGATGGTGCGTGGAGAGGGGTTGGGCTCTCTTTGGCGCGGATCTGGTTTGACCGTGAACAGGGCGATGATCGTCACGGCATCGCAGCTGGCGACATACGATCAGGCGAAGGAGGCCTTGCTGAATAAGGGGCTAATGCGAGACGGGCTGCCGACGCACGTTGCTGCAAGCTTTGCGGCGGGGTTGGTTGCGGCTGCGGCTTCGAATCCGGTGGATGTTGTGAAGACGAGGGTGATGAATATGAAGGTGGAAAAGGGAGTTGCGCCGCCCTATGCCGGAGCGCTGGACTGCGTGGTGAAGACGGTTAGGGCGGAGGGGCCGATGGCTCTCTATAAGGGATTTATTCCCACCGTTTCTCGCCAGGGACCTTTCACTGTTGTTCTATTCGTCACGCTCGAGCAGGTTCGATCCCTTCTCAAGGACTTCTGATTCTCTTCCTCTGTTCTGCGGTCTTTGTCATCTTCTCTGATACGGAAAGAGGGTTATTTGTGCTCGATAAATTTTCATTTATTGAGATTTCTTCAATACGCACGGCATCCTGAAAGCGATTGATTCGTCTGTTCATCTCTTTATTTCATCATCTTTTTAGTTTTATAACTAAGATTATGAACCGTCCGCTTTTCTTTATAGTACTTTTGTAATTGTTAATTAGAATTGTTGTCATGATTTAAGCGTTCACATCATTAATTCATTTCAGATATATTAATAATGAAGCCTTTAAATTCTATTTTTTTAACTGCCTCATCTTTCTTGGCTTATTAATATGTACAATTATATCTTTAGATTCGATGTTTCATAATTGATGCAAAGGAAGTCTCAGGGTGAGAGATTAAATATCATGATTGCCTATCGTTTAGCACAAGTGATCTTCTCCTGCTGTTTATAGTCCTGGTGTTGGTCCAACTTTCGGTGCATGTCATTAAGTTCTAAGGCGTGCTTGGTCAGTGGATGATGGTGGATTTGTTACTTTCTATTTGGTGCTGGCTAGTTTTTTACTTTAGTTCATTTCAGATCTTTTCTATTTTAAAATATGCACAGTGGCTCATTCTCGTCGTGCACTTCCTGCTACTTGTTCGGATGCTAGATCTTCTAGCTTCTGCATGCAAATTGATTGTCCTTGATATTCCATCAGTTCTAGCCTATCTCTTCATATGTTGCTTGATTTTGTTTACTAATTTGTTTTGCAAAATATCATCAGAATAATTCTTTAACTCTTACAAAAT

Network for GWHGAAEX001944

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module13

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00153.26	Mito_carr	5	104	2.10E-17
PF00153.26	Mito_carr	118	212	1.80E-17
PF00153.26	Mito_carr	219	309	5.70E-19

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006839	Biological Process	mitochondrial transport
GO:0031966	Cellular Component	mitochondrial membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	47.750
SRP064423	SRR2545915	Juvenile tuber	32.410
SRP108465	SRR5643513	five period of Gastrodia elata	43.170
	SRR5643514	five period of Gastrodia elata	67.560
	SRR5643515	five period of Gastrodia elata	60.430
	SRR5643524	five period of Gastrodia elata	33.790
	SRR5643525	five period of Gastrodia elata	224.560
	SRR5643528	five period of Gastrodia elata	133.980
	SRR5643658	five period of Gastrodia elata	100.580
	SRR5643659	five period of Gastrodia elata	55.510
	SRR5643660	five period of Gastrodia elata	26.590
	SRR5643661	five period of Gastrodia elata	37.920
	SRR5643662	five period of Gastrodia elata	137.450
	SRR5643663	five period of Gastrodia elata	72.370
	SRR5643664	five period of Gastrodia elata	275.830
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	266.360
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	143.850
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	227.480
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	186.550
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	212.430
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	229.230
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	422.860
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	243.710
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	219.530
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	577.010
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	210.770
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	210.770
SRP279888	Gastro	Gastrodia elata tuber	67.30
	Juven	Juvenile tuber	10.00
	Mother_Gastro	Mother tuber of Gastrodia elata	138.45
	Mother_Juven	Mother tuber of Juvenile	17.62