Detail information of GWHGAAEX001946/evm.TU.scaffold_114.76


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108762535|ref|YP_634966.1|1.00E-22FKBP-type peptidylprolyl isomerase [Myxococcus xanthus DK 1622]
KOGKOG05444.00E-57FKBP-type peptidyl-prolyl cis-trans isomerase
nrgi|743849928|ref|XP_010939747.1|2.11E-64PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 isoform X2 [Elaeis guineensis]
Swissprottr|O04287|FKB12_VICFA1.00E-62Peptidyl-prolyl cis-trans isomerase FKBP12
trEMBLtr|D7TU83|D7TU83_VITVI7.00E-64Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}
TAIRAT5G643504.00E-57FK506-binding protein 12

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011520722192093533-
Transcript Sequence

Network for GWHGAAEX001946

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00254.27FKBP_C141097.50E-25
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms80.750
SRR2545915Juvenile tuber91.790
SRP108465SRR5643513five period of Gastrodia elata224.860
SRR5643514five period of Gastrodia elata264.130
SRR5643515five period of Gastrodia elata241.140
SRR5643524five period of Gastrodia elata257.590
SRR5643525five period of Gastrodia elata257.090
SRR5643528five period of Gastrodia elata185.260
SRR5643658five period of Gastrodia elata194.740
SRR5643659five period of Gastrodia elata195.290
SRR5643660five period of Gastrodia elata189.800
SRR5643661five period of Gastrodia elata176.070
SRR5643662five period of Gastrodia elata170.510
SRR5643663five period of Gastrodia elata192.410
SRR5643664five period of Gastrodia elata190.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1123.500
SRR6049655Rhizomagastrodiae_C368-T10_good_196.060
SRR6049656Rhizomagastrodiae_C368-T07_good_1160.620
SRR6049657Rhizomagastrodiae_C368-T07_good_1124.230
SRR6049658Rhizomagastrodiae_C368-T04_good_1117.130
SRR6049659Rhizomagastrodiae_C368-T04_good_1109.130
SRR6049660Rhizomagastrodiae_C368-T01_good_1137.950
SRR6049661Rhizomagastrodiae_C368-T04_good_1129.950
SRR6049662Rhizomagastrodiae_C368-T01_good_1202.340
SRR6049663Rhizomagastrodiae_C368-T01_good_1202.370
SRR6049664Rhizomagastrodiae_C368-T10_good_1224.760
SRR6049665Rhizomagastrodiae_C368-T10_good_1224.760
SRP279888GastroGastrodia elata tuber 157.64
JuvenJuvenile tuber177.15
Mother_GastroMother tuber of Gastrodia elata 84.53
Mother_JuvenMother tuber of Juvenile 74.81