Detail information of GWHGAAEX001948/evm.TU.scaffold_114.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695044718|ref|XP_009410121.1|3.26E-74PREDICTED: putative DNA-binding protein ESCAROLA [Musa acuminata subsp. malaccensis]
Swissprottr|Q9S7C9|ESCA_ARATH5.00E-31Putative DNA-binding protein ESCAROLA
trEMBLtr|M0XL19|M0XL19_HORVD3.00E-69Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_60986.1}
TAIRAT5G497004.00E-58Predicted AT-hook DNA-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011521408562141671+
Transcript Sequence

Network for GWHGAAEX001948

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03479.14DUF296591736.80E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003680Molecular FunctionAT DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.090
SRR2545915Juvenile tuber12.610
SRP108465SRR5643513five period of Gastrodia elata12.270
SRR5643514five period of Gastrodia elata4.870
SRR5643515five period of Gastrodia elata30.980
SRR5643524five period of Gastrodia elata6.790
SRR5643525five period of Gastrodia elata40.270
SRR5643528five period of Gastrodia elata44.200
SRR5643658five period of Gastrodia elata12.970
SRR5643659five period of Gastrodia elata150.380
SRR5643660five period of Gastrodia elata116.900
SRR5643661five period of Gastrodia elata124.640
SRR5643662five period of Gastrodia elata201.320
SRR5643663five period of Gastrodia elata112.030
SRR5643664five period of Gastrodia elata507.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.550
SRR6049655Rhizomagastrodiae_C368-T10_good_119.960
SRR6049656Rhizomagastrodiae_C368-T07_good_111.840
SRR6049657Rhizomagastrodiae_C368-T07_good_111.920
SRR6049658Rhizomagastrodiae_C368-T04_good_111.510
SRR6049659Rhizomagastrodiae_C368-T04_good_110.630
SRR6049660Rhizomagastrodiae_C368-T01_good_110.430
SRR6049661Rhizomagastrodiae_C368-T04_good_110.480
SRR6049662Rhizomagastrodiae_C368-T01_good_16.360
SRR6049663Rhizomagastrodiae_C368-T01_good_19.560
SRR6049664Rhizomagastrodiae_C368-T10_good_16.390
SRR6049665Rhizomagastrodiae_C368-T10_good_16.390
SRP279888GastroGastrodia elata tuber 72.61
JuvenJuvenile tuber1.61
Mother_GastroMother tuber of Gastrodia elata 24.45
Mother_JuvenMother tuber of Juvenile 9.02