Detail information of GWHGAAEX001950/evm.TU.scaffold_114.80


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672190344|ref|XP_008775224.1|3.94E-62PREDICTED: transcription factor bHLH30-like [Phoenix dactylifera]
Swissprottr|P0CB25|BH131_ARATH5.00E-30Transcription factor bHLH131
trEMBLtr|M0VDI3|M0VDI3_HORVD6.00E-57Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_2366.1}
TAIRAT3G257102.00E-27basic helix-loop-helix 32

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011522099672211274-
Transcript Sequence

Network for GWHGAAEX001950

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH16632.70E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.070
SRR2545915Juvenile tuber1.500
SRP108465SRR5643513five period of Gastrodia elata6.550
SRR5643514five period of Gastrodia elata4.900
SRR5643515five period of Gastrodia elata5.520
SRR5643524five period of Gastrodia elata7.320
SRR5643525five period of Gastrodia elata5.100
SRR5643528five period of Gastrodia elata1.760
SRR5643658five period of Gastrodia elata8.000
SRR5643659five period of Gastrodia elata5.800
SRR5643660five period of Gastrodia elata3.350
SRR5643661five period of Gastrodia elata3.150
SRR5643662five period of Gastrodia elata4.960
SRR5643663five period of Gastrodia elata4.370
SRR5643664five period of Gastrodia elata10.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.970
SRR6049655Rhizomagastrodiae_C368-T10_good_12.170
SRR6049656Rhizomagastrodiae_C368-T07_good_12.420
SRR6049657Rhizomagastrodiae_C368-T07_good_12.760
SRR6049658Rhizomagastrodiae_C368-T04_good_11.420
SRR6049659Rhizomagastrodiae_C368-T04_good_11.040
SRR6049660Rhizomagastrodiae_C368-T01_good_11.700
SRR6049661Rhizomagastrodiae_C368-T04_good_11.080
SRR6049662Rhizomagastrodiae_C368-T01_good_14.080
SRR6049663Rhizomagastrodiae_C368-T01_good_11.680
SRR6049664Rhizomagastrodiae_C368-T10_good_12.520
SRR6049665Rhizomagastrodiae_C368-T10_good_12.520
SRP279888GastroGastrodia elata tuber 2.25
JuvenJuvenile tuber0.73
Mother_GastroMother tuber of Gastrodia elata 2.67
Mother_JuvenMother tuber of Juvenile 1.27