Gene detail

Detail information of GWHGAAEX001952/evm.TU.scaffold_114.83

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695009416\|ref\|XP_009391343.1\|	1.63E-63	PREDICTED: uncharacterized protein LOC103977521 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0SCE6\|M0SCE6_MUSAM	6.00E-64	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P06790_001}
TAIR	AT2G01710	5.00E-51	Chaperone DnaJ-domain superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000115	2247264	2277439	-

Transcript Sequence
>GWHTAAEX001952 TAAATTTTAACTATCGATGACTCTCCACTTAATGACATTTCGCCGTGTTCACCACGTGGCACCCGCATCAGCAAGTCAATTCATGGGCCGCATACTGCCCGGCTACCATCCAATCAAGGCGCGGCAAGGTAAATCGAGGCTCCGAGAGGCATCTTCTCCCCGCAGTAAAGACCAAAATGCCCTGAAGTATCACCGTCACAGTGCTCCTGCGGTCTCGCAACCTTGCACTTACAGTTCGAGAAGCTCCATGTAGCAGGTAGGTTTCATCCGAGCATAAGCTCATCGGCATCATCGTCGTCCTCTAGCATTCCAAAGCTGCGAAAGCCATGGAACAGCATCAAGGAGGAACCCCTGCGGGCGTAGCTACCAGCCCGACGATTTGGCTGGCAAACGCGGAGCTACTCCTCGCTTCCGGCGATTTCATTGGCGCAAAATCGTTTGCAGAGCGCGCCATCGAAGCCGATCCCCTTGTTGCCGGGGCTGACAACTTGCTTGCCGTTGCCGACGTCCTTCTTGCTGCAAACCGTGAGCACGTTGAAAACGTCAACCAAATCGATTGGTATTCCATCCTTCAGATCGAACCCTCTTCTTACTCCGACCCTGCTGCAGTTCGCCGACACTTCCGCCGTCTCGCGCTCCTCCTTCGCCCTGACTTGAATCAACTCCCATTCGCAGGCGACGCCCTCAAACTCGTACTATACGGGTGGTCCGTTCTATCCGATCCCGCTAAGAAATCACTCTTCGACTCCGAGCGACAGATCTCTACGTTGCCGGCATCAGCGAGGGAATCGGATTTCTGGACTTCGTGTCCCTTTTGCCACTACGTTCACAACTACGAGAGCATCTACGAGGGGCGTGATCTGCGGTGCCAGAGCTGCAGGCGGCCTTTCCGTGCTGCCGCGTTGCCCGCGTTCTGGACGGCGTGTTCCTATTGTTTTCATGTGTACGAATACGATGGCGCCTATCAAGGGCGAACTCTTCGCTGCCAAACTTGTCGTCAGGCGTTTAAAGCGACCGCGCTGATTTCGGCACCCCCCATCGTTCCTGGCACAGATATGTATTTCTGCTCATGGGGATTTTTTCCTCTAGGGTTTGAAGGGGAGAACGGAGCACGGAAGTATTTTAATCCCGTTGCTCCGGAGAATCGGCCACAGCAGGCTGAGAATGCCAAGGAAAGAAATGATGAGAATTCCGTGTCTGGCAAGAAGGGCTTAGTGTTGCATAAGAAAGTTATTGCGAAGAAGAGAGTAGGTGTCAGTTCAAGGAGGAGATATTTAGATTCCGGATTTGGCCCAAGTTCAGCTGGGAGGGAGATTAGGCCTGAGAGCATTGATATTAACAAGGAGTGGGAGAGCTGTGGTTAATTTTTTTTTCTTTGTTTATTTAGTTCATTTCTTCTAAAAATGTATTTTGGATATTTAATTTGTGGGCATGGAGACTGTTAGGAAGGTTGGTAATTTGTAATGGTGGCCAATTGCTAGTTAGGAATGCAGATTGGTGTATAAGGTTAGTAACAATTAGTTGTTCTTGGACAAATTGCAGCTGCCTTTGTAGAGAAATGATGAAGGCCTATTTTTGATATTCAAATCTTCATACCTTGTTTATGGGGAGCTAGTTAGCCTCACATCTTTTTAAACTGGGAGTTTGCCATTTATGCTTGCTAATGCATTCAATTACCTGATTCCATTAATGTTCGTAGTAGCTTGATATTTTGTTGTTGCTTTAGGCCTGCTTGACCATGTCATGGAAGTTGACTTGATGATTTTTTTTTTGCCTTGGCAGCCCAATTGTGACAGTTGTTGTTTGGTTTGTTGATATCTTGAAGCTGTGATGTCTATGTTGCTAAGATGTTCTATTTGGATGCGAGTGTTATTGAGATGCTAGTGCTATTTTGATGCCATTATACATTTGCTGTATTGTGGGGCATTTTTTAAAAGATGAAAAGTACCCAAATAGTTTTTTAATTATTTTTTCAATGATCATTGAAGTTCAATAACTTAATTGATGTCATCATTGATGTTGGCATCATGAACATTACACATGATACATTGCTGTTATCTCCCCATTGCTGTTATGTCATTACTTGCTGGTGACCGTTGCTGCTGACATCACCTAAAATGGTGAATAAGATAACCTTTGATTTTCTGTTGATAATCTAGTTGTTGGTAAAAAATCTGAGTTTTTAGGTTAAACGAAATAACGCTATTTGACGTTAACATTTCAGTGTTTATGAAATAAATAGCCAGAAGATAAATGCAATTTATTTGTTTCTTCTATTTTGGAAGCTACTGTCATTTTCTAATATTTATATGATACAAAATCTATTTTTTATTAATAACATTTTCTGTTTCAATGGCAGTTGTCAGCATGTTTCCAGATTCTAGTTTGACCGTGTATGAGATGCACTTTCATTTTTGCTAGGTGAAGTGTAAGAGCAATTCATAAACTTAATTGAATATTTGTTGTCTTCATTTTTTTGTACAGAAACTTGGAACTTTGCATCCGAGAAGGTAACTATCATGTTGAGGCTATTTGTTGCTCTCTGAGATCGGGTCCCGAGTCAAAGCTTTCAGCCTCTTTTGCTTGTATTTAGGATTTGAAGCTGTGGTTGTCTGGACCTCTTAGTTAACGTTCTCATGTATTTGTGAGCCTAAAGTTGTAATTATCTTGTCTCAGTAACAAAAAATTGAATGTTTATTTTGTATTTTATCCCAAAAAATGGTCTAGCTCTTAGAATTCCGCATGCAGTATAATTAGTGCAATGAAATCC

Network for GWHGAAEX001952

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00226.30	DnaJ	77	140	1.50E-08

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.670
SRP064423	SRR2545915	Juvenile tuber	18.830
SRP108465	SRR5643513	five period of Gastrodia elata	19.050
	SRR5643514	five period of Gastrodia elata	19.480
	SRR5643515	five period of Gastrodia elata	19.610
	SRR5643524	five period of Gastrodia elata	18.310
	SRR5643525	five period of Gastrodia elata	21.060
	SRR5643528	five period of Gastrodia elata	14.070
	SRR5643658	five period of Gastrodia elata	17.620
	SRR5643659	five period of Gastrodia elata	25.500
	SRR5643660	five period of Gastrodia elata	24.450
	SRR5643661	five period of Gastrodia elata	24.060
	SRR5643662	five period of Gastrodia elata	22.150
	SRR5643663	five period of Gastrodia elata	22.920
	SRR5643664	five period of Gastrodia elata	23.400
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.430
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	22.830
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.310
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	21.290
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	21.720
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	22.950
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	21.130
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	20.340
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	20.530
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	21.200
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	18.430
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	18.430
SRP279888	Gastro	Gastrodia elata tuber	19.52
	Juven	Juvenile tuber	24.37
	Mother_Gastro	Mother tuber of Gastrodia elata	23.23
	Mother_Juven	Mother tuber of Juvenile	23.29