Detail information of GWHGAAEX001956/evm.TU.scaffold_114.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|57641539|ref|YP_184017.1|5.00E-25V-type ATP synthase subunit D [Thermococcus kodakarensis KOD1]
KOGKOG16472.00E-153Vacuolar H+-ATPase V1 sector, subunit D
nrgi|743849019|ref|XP_010939515.1|1.76E-167PREDICTED: V-type proton ATPase subunit D-like [Elaeis guineensis]
Swissprottr|Q9XGM1|VATD_ARATH7.00E-154V-type proton ATPase subunit D
trEMBLtr|A0A061DJY4|A0A061DJY4_THECC1.00E-161ATP synthase subunit d, putative isoform 1 {ECO:0000313|EMBL:EOX92950.1}
TAIRAT3G587302.00E-153vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011523569382358207+
Transcript Sequence

Network for GWHGAAEX001956

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01813.16ATP-synt_D172135.30E-70
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02149ATPeV1D, ATP6M Metabolic pathways map01100
Oxidative phosphorylationmap00190
mTOR signaling pathwaymap04150
Phagosomemap04145
Collecting duct acid secretionmap04966
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:0042626Molecular FunctionATPase activity, coupled to transmembrane movement of substances

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms54.030
SRR2545915Juvenile tuber48.910
SRP108465SRR5643513five period of Gastrodia elata49.930
SRR5643514five period of Gastrodia elata45.590
SRR5643515five period of Gastrodia elata47.410
SRR5643524five period of Gastrodia elata45.210
SRR5643525five period of Gastrodia elata51.620
SRR5643528five period of Gastrodia elata49.010
SRR5643658five period of Gastrodia elata49.870
SRR5643659five period of Gastrodia elata68.750
SRR5643660five period of Gastrodia elata64.340
SRR5643661five period of Gastrodia elata56.700
SRR5643662five period of Gastrodia elata64.730
SRR5643663five period of Gastrodia elata65.410
SRR5643664five period of Gastrodia elata73.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_153.870
SRR6049655Rhizomagastrodiae_C368-T10_good_149.640
SRR6049656Rhizomagastrodiae_C368-T07_good_155.110
SRR6049657Rhizomagastrodiae_C368-T07_good_155.010
SRR6049658Rhizomagastrodiae_C368-T04_good_147.400
SRR6049659Rhizomagastrodiae_C368-T04_good_145.430
SRR6049660Rhizomagastrodiae_C368-T01_good_143.340
SRR6049661Rhizomagastrodiae_C368-T04_good_147.230
SRR6049662Rhizomagastrodiae_C368-T01_good_144.720
SRR6049663Rhizomagastrodiae_C368-T01_good_145.900
SRR6049664Rhizomagastrodiae_C368-T10_good_161.950
SRR6049665Rhizomagastrodiae_C368-T10_good_161.950
SRP279888GastroGastrodia elata tuber 44.51
JuvenJuvenile tuber32.60
Mother_GastroMother tuber of Gastrodia elata 39.78
Mother_JuvenMother tuber of Juvenile 35.11