Detail information of GWHGAAEX001957/evm.TU.scaffold_114.89


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|514797014|ref|XP_004973693.1|7.83E-70PREDICTED: sodium channel modifier 1-like [Setaria italica]
trEMBLtr|K3YJB2|K3YJB2_SETIT3.00E-70Uncharacterized protein {ECO:0000313|EnsemblPlants:Si014331m}
TAIRHS131289983.00E-20Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011523712592384479+
Transcript Sequence

Network for GWHGAAEX001957

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15803.4zf-SCNM147739.50E-14
PF15805.4SCNM1_acidic1872265.10E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms65.470
SRR2545915Juvenile tuber59.480
SRP108465SRR5643513five period of Gastrodia elata33.610
SRR5643514five period of Gastrodia elata30.440
SRR5643515five period of Gastrodia elata29.040
SRR5643524five period of Gastrodia elata27.050
SRR5643525five period of Gastrodia elata17.980
SRR5643528five period of Gastrodia elata15.900
SRR5643658five period of Gastrodia elata16.030
SRR5643659five period of Gastrodia elata28.860
SRR5643660five period of Gastrodia elata35.020
SRR5643661five period of Gastrodia elata24.070
SRR5643662five period of Gastrodia elata25.860
SRR5643663five period of Gastrodia elata31.680
SRR5643664five period of Gastrodia elata28.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.790
SRR6049655Rhizomagastrodiae_C368-T10_good_119.940
SRR6049656Rhizomagastrodiae_C368-T07_good_122.920
SRR6049657Rhizomagastrodiae_C368-T07_good_136.950
SRR6049658Rhizomagastrodiae_C368-T04_good_122.830
SRR6049659Rhizomagastrodiae_C368-T04_good_130.400
SRR6049660Rhizomagastrodiae_C368-T01_good_123.110
SRR6049661Rhizomagastrodiae_C368-T04_good_121.510
SRR6049662Rhizomagastrodiae_C368-T01_good_123.090
SRR6049663Rhizomagastrodiae_C368-T01_good_126.290
SRR6049664Rhizomagastrodiae_C368-T10_good_133.820
SRR6049665Rhizomagastrodiae_C368-T10_good_133.820
SRP279888GastroGastrodia elata tuber 33.87
JuvenJuvenile tuber44.34
Mother_GastroMother tuber of Gastrodia elata 25.09
Mother_JuvenMother tuber of Juvenile 30.01