Detail information of GWHGAAEX001965/evm.TU.scaffold_114.97


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427736030|ref|YP_007055574.1|6.00E-64cytochrome P450 [Rivularia sp. PCC 7116]
KOGKOG01570Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
nrgi|115479545|ref|NP_001063366.1|0Os09g0457100 [Oryza sativa Japonica Group]
Swissprottr|Q0J185|ABAH3_ORYSJ0Abscisic acid 8'-hydroxylase 3
trEMBLtr|I1QPJ7|I1QPJ7_ORYGL0Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA09G0097600.1}
TAIRAT3G192700cytochrome P450, family 707, subfamily A, polypeptide 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011528523502867011+
Transcript Sequence

Network for GWHGAAEX001965

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.21p450414501.30E-65
Protein Sequence

Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP707A4

KEGG pathway

KO Enzyme pathway mapID
K09843CYP707A Carotenoid biosynthesis map00906

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0005506Molecular Functioniron ion binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037Molecular Functionheme binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.890
SRR2545915Juvenile tuber3.730
SRP108465SRR5643513five period of Gastrodia elata5.330
SRR5643514five period of Gastrodia elata8.550
SRR5643515five period of Gastrodia elata4.260
SRR5643524five period of Gastrodia elata3.460
SRR5643525five period of Gastrodia elata3.970
SRR5643528five period of Gastrodia elata1.880
SRR5643658five period of Gastrodia elata5.460
SRR5643659five period of Gastrodia elata4.430
SRR5643660five period of Gastrodia elata4.310
SRR5643661five period of Gastrodia elata3.140
SRR5643662five period of Gastrodia elata3.710
SRR5643663five period of Gastrodia elata2.450
SRR5643664five period of Gastrodia elata4.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.300
SRR6049655Rhizomagastrodiae_C368-T10_good_14.360
SRR6049656Rhizomagastrodiae_C368-T07_good_16.640
SRR6049657Rhizomagastrodiae_C368-T07_good_111.630
SRR6049658Rhizomagastrodiae_C368-T04_good_111.310
SRR6049659Rhizomagastrodiae_C368-T04_good_114.210
SRR6049660Rhizomagastrodiae_C368-T01_good_111.220
SRR6049661Rhizomagastrodiae_C368-T04_good_18.430
SRR6049662Rhizomagastrodiae_C368-T01_good_15.420
SRR6049663Rhizomagastrodiae_C368-T01_good_110.870
SRR6049664Rhizomagastrodiae_C368-T10_good_16.410
SRR6049665Rhizomagastrodiae_C368-T10_good_16.410
SRP279888GastroGastrodia elata tuber 4.85
JuvenJuvenile tuber3.06
Mother_GastroMother tuber of Gastrodia elata 2.05
Mother_JuvenMother tuber of Juvenile 2.00