Detail information of GWHGAAEX001966/evm.TU.scaffold_114.100
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2619 | 0 | Fucosyltransferase |
| nr | gi|695009443|ref|XP_009391357.1| | 0 | PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like isoform X2 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9FX97|FUT12_ARATH | 0 | Putative fucosyltransferase-like protein |
| trEMBL | tr|M0SCG5|M0SCG5_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P06980_001} |
| TAIR | AT1G49710 | 0 | fucosyltransferase 12 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000115 | 2929922 | 2994227 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001966
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00852.18 | Glyco_transf_10 | 201 | 361 | 8.00E-29 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT10 |
| Carbohydrate-Active enzymes Family | GT10 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00753 | E2.4.1.214 | Metabolic pathways | map01100 |
| Various types of N-glycan biosynthesis | map00513 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006486 | Biological Process | protein glycosylation |
| GO:0008417 | Molecular Function | fucosyltransferase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 45.770 |
| SRR2545915 | Juvenile tuber | 39.490 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 20.440 |
| SRR5643514 | five period of Gastrodia elata | 12.880 | |
| SRR5643515 | five period of Gastrodia elata | 12.960 | |
| SRR5643524 | five period of Gastrodia elata | 13.890 | |
| SRR5643525 | five period of Gastrodia elata | 18.260 | |
| SRR5643528 | five period of Gastrodia elata | 14.990 | |
| SRR5643658 | five period of Gastrodia elata | 22.270 | |
| SRR5643659 | five period of Gastrodia elata | 15.050 | |
| SRR5643660 | five period of Gastrodia elata | 15.250 | |
| SRR5643661 | five period of Gastrodia elata | 10.990 | |
| SRR5643662 | five period of Gastrodia elata | 8.250 | |
| SRR5643663 | five period of Gastrodia elata | 10.730 | |
| SRR5643664 | five period of Gastrodia elata | 11.280 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 33.370 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 34.100 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 26.510 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 49.720 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 39.680 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 42.450 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 37.680 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 36.570 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 20.450 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 21.420 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 13.110 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 13.110 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 21.66 |
| Juven | Juvenile tuber | 47.30 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 21.40 | |
| Mother_Juven | Mother tuber of Juvenile | 40.34 |