Gene detail

Detail information of GWHGAAEX001969/evm.TU.scaffold_114.103

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|18976969\|ref\|NP_578326.1\|	1.00E-108	IAA-amino acid hydrolase [Pyrococcus furiosus DSM 3638]
nr	gi\|695009495\|ref\|XP_009391385.1\|	0	PREDICTED: IAA-amino acid hydrolase ILR1-like 6 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q5Z678\|ILL6_ORYSJ	0	IAA-amino acid hydrolase ILR1-like 6 (Precursor)
trEMBL	tr\|M0SCJ1\|M0SCJ1_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P07240_001}
TAIR	AT1G44350	0	IAA-leucine resistant (ILR)-like gene 6

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000115	3056425	3062522	-

Transcript Sequence
>GWHTAAEX001969 CTATAGTCCTGCTCTCGCCTCTCAAAGCCTTTCCCTTTTGGGTCTCTCTCTCCTTTTTGGGGAGGCGGAAGAGATTTAGGTCTGGAGAAGGAACCCTTCTCCATCTGCTTCAGTTCACTGGCCCATACGATTCCATCAATCTCCTGCTCTTCGATCAGGTCTCATGGCGCGCGATTTGGGTGAGCTTTTGGTTTTGCTTCTGTCATCTTTCCTCCTTGTGTGGAAGACGGGAGCCGGGGATTTGGAAATTGAGGAGTTCCTCTTAGGAGGGGTTGTTCAGGCATGGAGATCAGGGGAGGCGAACGGGAGCAGGATCTCGTCGCAGAATGGGGAGGAGGAGGATTGGAAGGAGGAGATTCTGCGTCTTGCGTGGAGATCGGAGGCTGTGAGATGGGTGAAGGGATTGAGGCGGAGGATTCACCAATACCCGGAACTGGCTTACGAAGAGGTGGAAACGGGAAGGCTGATCATGGAGGAACTTGAGGAGATGGGCGTCGAGTATCGTTTCCCGTTGGCCCGGACGGGGATCTTGGCCTCTATTGGAACCGGAGGACCTCCGATTGTGGCGCTTAGGGCTGATATGGATGCTCTTCCGATTCAGGAAGCAGTTGAATGGGAGTACAAAAGCAAGGTGCCTGGCAAAATGCATGCCTGTGGCCATGATGCGCATGTGGCAATGCTCGTTGGTGCAGCCAAGATTTTAAAGGCCCGTGAAGCACATCTTAAGGGAACCGTTAAGCTGCTGTTTCAGCCAGCGGAGGAAGCAGGAATAGGTGCCAAGAGGATGATTGAAGATGGGGCGTTAGAGGGCGTGGAGGCCATATTTGCTGCTCATGTATCTCATGAACATCCTACCTCCATTGTTGGGTCCAAGGCCGGCCCTCTACTGGCCGGGTGCGGCTTCTTCAAAGCAGAGATAAGGGGCAGACAGAGCTCCGCGGGCAATCCCCACAGTTCAATTGACCCCATATTGGCTGCCTCTGCTGCCGTGATCAGTTTGCAGAATATTGTATCCCGGGAAGCCAACCCTTTGGACTCGCAGGTGGTCTCAGTGGCAGCTGTAAACGGAGGAAACAATCTCGACCTGGTGCCTGAAAGCGTCTTCCTTGGTGGAACTTTCAGAGCTTTCTCAAACGCTAGCTTTTATAAGTTGCGCCAGAGAATAGAAGAGGTTATTATGATGCAGTCCAGTGTGTACAGATGTGCGGCCTTGGTGGACTTCTTTGAGAAAGAGCGATTCTACCCGCCCATGGTTAACGACGAGGCCATGTACAGGCATGTGAGGAGGGTGGCAGTGGGGCTATTTGGGCAGAGGAGGTACCTGACGGTACCTCAGGTGATGGGGGCGGAGGACTTCTCATTTTACTCGGAGTTGATCCCCGCCGCCTTCTACTACATTGGGGTGAGGAACGAATCGCTGGGCTCCATACACACCGCACATTCACCGCACTTTATGATCGACGAAGATGTGCTGCCGGCCGGAGCTGCTTTCCACGCCGCCATTGCCGAGAGATTTCTCTCTGACCGGGCATACATGAAGGAAGCTTAGCCCACACTACAAGCATTTATAAACCCTTCTCTTTGAAGAGATGAAGAAGCACTTCTTTTAATTCAAGAGGCGATTGGTGATGAATTCCAAATGAGGATCAGGGCGGTAGCCCAAAAGGAGATTTAGATTTGAGCAAAGATTGATGAGTAGGTCAATGGTGCTTTATTGAGGGATTATGTAGCGATCATTGATCTATGTGCCACTGATGGTGTTTGATTCAGTTTGCTGAATGTAGGACTGCCCTCAATTTTGAAAGAGAGAGAGAGAAAGAGACTAGAGAAAATTTAGTGTCATAATTATATATATGTTGTAATTCATTTTTAAATGTATATTTTTATTTTTGTGAATATGGAGCAGATGTATTTTGCTTATATTGTTTCTTGGTGTTTCTATTATGCCTTTTTACATCACATGAGGTCATCACTCATCCCAACTGGTATCCAAGTTTGATTATGAGAAGT

Network for GWHGAAEX001969

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01546.27	Peptidase_M20	135	449	3.00E-37

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.450
SRP064423	SRR2545915	Juvenile tuber	12.390
SRP108465	SRR5643513	five period of Gastrodia elata	10.890
	SRR5643514	five period of Gastrodia elata	11.130
	SRR5643515	five period of Gastrodia elata	13.660
	SRR5643524	five period of Gastrodia elata	9.600
	SRR5643525	five period of Gastrodia elata	40.890
	SRR5643528	five period of Gastrodia elata	53.320
	SRR5643658	five period of Gastrodia elata	28.990
	SRR5643659	five period of Gastrodia elata	28.930
	SRR5643660	five period of Gastrodia elata	26.470
	SRR5643661	five period of Gastrodia elata	33.630
	SRR5643662	five period of Gastrodia elata	47.820
	SRR5643663	five period of Gastrodia elata	40.810
	SRR5643664	five period of Gastrodia elata	47.120
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.820
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.060
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.180
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.250
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.040
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.020
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	9.100
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.650
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.160
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.320
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.250
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.250
SRP279888	Gastro	Gastrodia elata tuber	31.91
	Juven	Juvenile tuber	18.96
	Mother_Gastro	Mother tuber of Gastrodia elata	21.55
	Mother_Juven	Mother tuber of Juvenile	21.73