Detail information of GWHGAAEX001975/evm.TU.scaffold_114.109
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|330468561|ref|YP_004406304.1| | 1.00E-25 | hypothetical protein VAB18032_23020 [Verrucosispora maris AB-18-032] |
| KOG | KOG2275 | 0 | Aminoacylase ACY1 and related metalloexopeptidases |
| nr | gi|695038264|ref|XP_009406638.1| | 0 | PREDICTED: aminoacylase-1-like [Musa acuminata subsp. malaccensis] |
| trEMBL | tr|A0A059BZ79|A0A059BZ79_EUCGR | 0 | Aminoacylase-1 {ECO:0000256|PIRNR:PIRNR036696} |
| TAIR | AT1G44180 | 0 | Peptidase M20/M25/M40 family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000115 | 3149174 | 3179695 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001975
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01546.27 | Peptidase_M20 | 98 | 411 | 3.10E-29 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006520 | Biological Process | cellular amino acid metabolic process |
| GO:0006508 | Biological Process | proteolysis |
| GO:0008237 | Molecular Function | metallopeptidase activity |
| GO:0016787 | Molecular Function | hydrolase activity |
| GO:0004046 | Molecular Function | aminoacylase activity |
| GO:0005737 | Cellular Component | cytoplasm |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 17.330 |
| SRR2545915 | Juvenile tuber | 18.260 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 43.430 |
| SRR5643514 | five period of Gastrodia elata | 42.920 | |
| SRR5643515 | five period of Gastrodia elata | 35.210 | |
| SRR5643524 | five period of Gastrodia elata | 39.610 | |
| SRR5643525 | five period of Gastrodia elata | 27.970 | |
| SRR5643528 | five period of Gastrodia elata | 29.770 | |
| SRR5643658 | five period of Gastrodia elata | 31.020 | |
| SRR5643659 | five period of Gastrodia elata | 28.970 | |
| SRR5643660 | five period of Gastrodia elata | 29.940 | |
| SRR5643661 | five period of Gastrodia elata | 32.880 | |
| SRR5643662 | five period of Gastrodia elata | 27.780 | |
| SRR5643663 | five period of Gastrodia elata | 28.250 | |
| SRR5643664 | five period of Gastrodia elata | 29.210 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 37.000 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 71.310 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 38.700 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 35.610 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 24.910 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 26.320 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 34.330 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 29.480 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 56.620 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 49.540 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 65.800 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 65.800 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 24.85 |
| Juven | Juvenile tuber | 26.47 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 20.72 | |
| Mother_Juven | Mother tuber of Juvenile | 16.38 |