Detail information of GWHGAAEX001978/evm.TU.scaffold_114.112


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|221632505|ref|YP_002521726.1|6.00E-08LysM domain-containing protein [Thermomicrobium roseum DSM 5159]
nrgi|225459538|ref|XP_002285848.1|1.61E-106PREDICTED: lysM domain-containing GPI-anchored protein 1 [Vitis vinifera]
Swissprottr|Q93ZH0|LYM1_ARATH1.00E-97LysM domain-containing GPI-anchored protein 1 (Precursor)
trEMBLtr|F6H0S4|F6H0S4_VITVI6.00E-107Putative uncharacterized protein {ECO:0000313|EMBL:CCB45493.1}
TAIRAT1G218804.00E-97lysm domain GPI-anchored protein 1 precursor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011531984713199127-
Transcript Sequence

Network for GWHGAAEX001978

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01476.19LysM1061523.60E-08
PF01476.19LysM1722141.30E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.770
SRR2545915Juvenile tuber12.550
SRP108465SRR5643513five period of Gastrodia elata27.560
SRR5643514five period of Gastrodia elata28.440
SRR5643515five period of Gastrodia elata25.340
SRR5643524five period of Gastrodia elata21.630
SRR5643525five period of Gastrodia elata10.510
SRR5643528five period of Gastrodia elata9.810
SRR5643658five period of Gastrodia elata7.770
SRR5643659five period of Gastrodia elata14.370
SRR5643660five period of Gastrodia elata13.630
SRR5643661five period of Gastrodia elata12.790
SRR5643662five period of Gastrodia elata12.170
SRR5643663five period of Gastrodia elata13.480
SRR5643664five period of Gastrodia elata9.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.500
SRR6049655Rhizomagastrodiae_C368-T10_good_167.060
SRR6049656Rhizomagastrodiae_C368-T07_good_128.640
SRR6049657Rhizomagastrodiae_C368-T07_good_128.040
SRR6049658Rhizomagastrodiae_C368-T04_good_110.690
SRR6049659Rhizomagastrodiae_C368-T04_good_18.270
SRR6049660Rhizomagastrodiae_C368-T01_good_122.100
SRR6049661Rhizomagastrodiae_C368-T04_good_126.350
SRR6049662Rhizomagastrodiae_C368-T01_good_151.830
SRR6049663Rhizomagastrodiae_C368-T01_good_126.710
SRR6049664Rhizomagastrodiae_C368-T10_good_138.100
SRR6049665Rhizomagastrodiae_C368-T10_good_138.100
SRP279888GastroGastrodia elata tuber 14.62
JuvenJuvenile tuber26.84
Mother_GastroMother tuber of Gastrodia elata 8.46
Mother_JuvenMother tuber of Juvenile 12.86