Detail information of GWHGAAEX001980/evm.TU.scaffold_114.115


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|152997471|ref|YP_001342306.1|3.00E-07hypothetical protein Mmwyl1_3468 [Marinomonas sp. MWYL1]
nrgi|743848455|ref|XP_010939363.1|2.99E-149PREDICTED: WAT1-related protein At1g21890 isoform X1 [Elaeis guineensis]
Swissprottr|Q9SUF1|WTR31_ARATH1.00E-112WAT1-related protein At4g08290
trEMBLtr|B8BG55|B8BG55_ORYSI2.00E-135Uncharacterized protein {ECO:0000313|EMBL:EEC66707.1}
TAIRAT4G082904.00E-112nodulin MtN21 /EamA-like transporter family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011532774713281582+
Transcript Sequence

Network for GWHGAAEX001980

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00892.19EamA201582.60E-15
PF00892.19EamA1953357.20E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016020Cellular Componentmembrane
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.610
SRR2545915Juvenile tuber9.290
SRP108465SRR5643513five period of Gastrodia elata55.010
SRR5643514five period of Gastrodia elata70.800
SRR5643515five period of Gastrodia elata40.300
SRR5643524five period of Gastrodia elata49.900
SRR5643525five period of Gastrodia elata140.300
SRR5643528five period of Gastrodia elata60.750
SRR5643658five period of Gastrodia elata99.960
SRR5643659five period of Gastrodia elata18.370
SRR5643660five period of Gastrodia elata11.660
SRR5643661five period of Gastrodia elata12.870
SRR5643662five period of Gastrodia elata33.070
SRR5643663five period of Gastrodia elata22.840
SRR5643664five period of Gastrodia elata25.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_151.150
SRR6049655Rhizomagastrodiae_C368-T10_good_153.730
SRR6049656Rhizomagastrodiae_C368-T07_good_162.000
SRR6049657Rhizomagastrodiae_C368-T07_good_156.520
SRR6049658Rhizomagastrodiae_C368-T04_good_159.930
SRR6049659Rhizomagastrodiae_C368-T04_good_163.080
SRR6049660Rhizomagastrodiae_C368-T01_good_146.700
SRR6049661Rhizomagastrodiae_C368-T04_good_142.390
SRR6049662Rhizomagastrodiae_C368-T01_good_140.010
SRR6049663Rhizomagastrodiae_C368-T01_good_141.930
SRR6049664Rhizomagastrodiae_C368-T10_good_176.130
SRR6049665Rhizomagastrodiae_C368-T10_good_176.130
SRP279888GastroGastrodia elata tuber 28.47
JuvenJuvenile tuber29.75
Mother_GastroMother tuber of Gastrodia elata 19.95
Mother_JuvenMother tuber of Juvenile 17.31