Detail information of GWHGAAEX001984/evm.TU.scaffold_115.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743786819|ref|XP_010922265.1|9.83E-49PREDICTED: pathogenesis-related protein 1-like [Elaeis guineensis]
Swissprottr|Q05736|PR1_ASPOF1.00E-42Pathogenesis-related protein 1
trEMBLtr|B3TLX2|B3TLX2_ELAGV1.00E-46Early flowering protein 1 {ECO:0000313|EMBL:ACF06553.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001166543066570+
Transcript Sequence

Network for GWHGAAEX001984

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00407.18Bet_v_121514.50E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006952Biological Processdefense response
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0010427Molecular Functionabscisic acid binding
GO:0038023Molecular Functionsignaling receptor activity
GO:0004864Molecular Functionprotein phosphatase inhibitor activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4795.220
SRR2545915Juvenile tuber1542.760
SRP108465SRR5643513five period of Gastrodia elata138.210
SRR5643514five period of Gastrodia elata110.730
SRR5643515five period of Gastrodia elata290.730
SRR5643524five period of Gastrodia elata444.360
SRR5643525five period of Gastrodia elata575.000
SRR5643528five period of Gastrodia elata1614.930
SRR5643658five period of Gastrodia elata207.860
SRR5643659five period of Gastrodia elata563.620
SRR5643660five period of Gastrodia elata1168.110
SRR5643661five period of Gastrodia elata1108.500
SRR5643662five period of Gastrodia elata1733.340
SRR5643663five period of Gastrodia elata1493.190
SRR5643664five period of Gastrodia elata1931.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.550
SRR6049655Rhizomagastrodiae_C368-T10_good_139.710
SRR6049656Rhizomagastrodiae_C368-T07_good_132.880
SRR6049657Rhizomagastrodiae_C368-T07_good_131.720
SRR6049658Rhizomagastrodiae_C368-T04_good_175.210
SRR6049659Rhizomagastrodiae_C368-T04_good_1109.190
SRR6049660Rhizomagastrodiae_C368-T01_good_1109.760
SRR6049661Rhizomagastrodiae_C368-T04_good_1163.420
SRR6049662Rhizomagastrodiae_C368-T01_good_148.970
SRR6049663Rhizomagastrodiae_C368-T01_good_191.280
SRR6049664Rhizomagastrodiae_C368-T10_good_193.320
SRR6049665Rhizomagastrodiae_C368-T10_good_193.320
SRP279888GastroGastrodia elata tuber 2,166.74
JuvenJuvenile tuber457.25
Mother_GastroMother tuber of Gastrodia elata 4,582.04
Mother_JuvenMother tuber of Juvenile 2,431.13