Detail information of GWHGAAEX001985/evm.TU.scaffold_115.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743784417|ref|XP_010921658.1|2.85E-43PREDICTED: uncharacterized protein LOC105045183 [Elaeis guineensis]
Swissprottr|Q05349|12KD_FRAAN2.00E-07Auxin-repressed 12.5 kDa protein
trEMBLtr|M1GS79|M1GS79_ELAGV1.00E-43Putative dormancy/auxin associated protein {ECO:0000313|EMBL:AGE46024.1}
TAIRAT1G562208.00E-25Dormancy/auxin associated family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000116123798125933+
Transcript Sequence

Network for GWHGAAEX001985

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05564.11Auxin_repressed451189.60E-10
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms517.220
SRR2545915Juvenile tuber359.570
SRP108465SRR5643513five period of Gastrodia elata154.440
SRR5643514five period of Gastrodia elata158.150
SRR5643515five period of Gastrodia elata132.390
SRR5643524five period of Gastrodia elata129.370
SRR5643525five period of Gastrodia elata648.500
SRR5643528five period of Gastrodia elata161.960
SRR5643658five period of Gastrodia elata454.410
SRR5643659five period of Gastrodia elata515.020
SRR5643660five period of Gastrodia elata633.870
SRR5643661five period of Gastrodia elata573.270
SRR5643662five period of Gastrodia elata825.280
SRR5643663five period of Gastrodia elata1054.100
SRR5643664five period of Gastrodia elata1476.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1426.740
SRR6049655Rhizomagastrodiae_C368-T10_good_190.070
SRR6049656Rhizomagastrodiae_C368-T07_good_1226.340
SRR6049657Rhizomagastrodiae_C368-T07_good_1541.730
SRR6049658Rhizomagastrodiae_C368-T04_good_1485.920
SRR6049659Rhizomagastrodiae_C368-T04_good_1646.860
SRR6049660Rhizomagastrodiae_C368-T01_good_1351.970
SRR6049661Rhizomagastrodiae_C368-T04_good_1365.820
SRR6049662Rhizomagastrodiae_C368-T01_good_1132.180
SRR6049663Rhizomagastrodiae_C368-T01_good_1160.530
SRR6049664Rhizomagastrodiae_C368-T10_good_1185.640
SRR6049665Rhizomagastrodiae_C368-T10_good_1185.640
SRP279888GastroGastrodia elata tuber 1,080.82
JuvenJuvenile tuber453.47
Mother_GastroMother tuber of Gastrodia elata 159.97
Mother_JuvenMother tuber of Juvenile 344.00