Detail information of GWHGAAEX001992/evm.TU.scaffold_115.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672132638|ref|XP_008789905.1|4.35E-150PREDICTED: nuclear pore complex protein Nup214-like [Phoenix dactylifera]
Swissprottr|Q38931|FKB62_ARATH2.00E-07Peptidyl-prolyl cis-trans isomerase FKBP62
trEMBLtr|M0TSQ2|M0TSQ2_MUSAM6.00E-113Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P22490_001}
TAIRAT3G167602.00E-34Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000116257318265845+
Transcript Sequence

Network for GWHGAAEX001992

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.610
SRR2545915Juvenile tuber23.050
SRP108465SRR5643513five period of Gastrodia elata28.010
SRR5643514five period of Gastrodia elata27.030
SRR5643515five period of Gastrodia elata33.560
SRR5643524five period of Gastrodia elata29.090
SRR5643525five period of Gastrodia elata25.960
SRR5643528five period of Gastrodia elata34.160
SRR5643658five period of Gastrodia elata25.410
SRR5643659five period of Gastrodia elata36.930
SRR5643660five period of Gastrodia elata30.890
SRR5643661five period of Gastrodia elata32.550
SRR5643662five period of Gastrodia elata29.290
SRR5643663five period of Gastrodia elata28.860
SRR5643664five period of Gastrodia elata24.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.100
SRR6049655Rhizomagastrodiae_C368-T10_good_139.370
SRR6049656Rhizomagastrodiae_C368-T07_good_129.040
SRR6049657Rhizomagastrodiae_C368-T07_good_127.130
SRR6049658Rhizomagastrodiae_C368-T04_good_117.970
SRR6049659Rhizomagastrodiae_C368-T04_good_115.850
SRR6049660Rhizomagastrodiae_C368-T01_good_122.780
SRR6049661Rhizomagastrodiae_C368-T04_good_118.080
SRR6049662Rhizomagastrodiae_C368-T01_good_125.510
SRR6049663Rhizomagastrodiae_C368-T01_good_124.580
SRR6049664Rhizomagastrodiae_C368-T10_good_138.570
SRR6049665Rhizomagastrodiae_C368-T10_good_138.570
SRP279888GastroGastrodia elata tuber 13.03
JuvenJuvenile tuber27.35
Mother_GastroMother tuber of Gastrodia elata 22.54
Mother_JuvenMother tuber of Juvenile 24.01