Detail information of GWHGAAEX001999/evm.TU.scaffold_115.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|221369989|ref|YP_002521085.1|5.00E-13Glycosyl transferase, family 8 [Rhodobacter sphaeroides KD131]
nrgi|672145612|ref|XP_008796730.1|1.50E-176PREDICTED: probable galacturonosyltransferase-like 3 [Phoenix dactylifera]
Swissprottr|Q9M8J2|GATL4_ARATH2.00E-143Probable galacturonosyltransferase-like 4
trEMBLtr|C5YCL5|C5YCL5_SORBI1.00E-160Putative uncharacterized protein Sb06g023460 {ECO:0000313|EMBL:EES11166.1}
TAIRAT3G062607.00E-143galacturonosyltransferase-like 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000116362132363581+
Transcript Sequence

Network for GWHGAAEX001999

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01501.19Glyco_transf_8503073.40E-48
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016757Molecular Functiontransferase activity, transferring glycosyl groups

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.250
SRR2545915Juvenile tuber28.860
SRP108465SRR5643513five period of Gastrodia elata56.750
SRR5643514five period of Gastrodia elata45.610
SRR5643515five period of Gastrodia elata69.230
SRR5643524five period of Gastrodia elata37.910
SRR5643525five period of Gastrodia elata53.290
SRR5643528five period of Gastrodia elata24.930
SRR5643658five period of Gastrodia elata59.780
SRR5643659five period of Gastrodia elata97.660
SRR5643660five period of Gastrodia elata96.500
SRR5643661five period of Gastrodia elata94.590
SRR5643662five period of Gastrodia elata91.040
SRR5643663five period of Gastrodia elata106.020
SRR5643664five period of Gastrodia elata198.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_187.610
SRR6049655Rhizomagastrodiae_C368-T10_good_172.200
SRR6049656Rhizomagastrodiae_C368-T07_good_184.180
SRR6049657Rhizomagastrodiae_C368-T07_good_178.730
SRR6049658Rhizomagastrodiae_C368-T04_good_149.990
SRR6049659Rhizomagastrodiae_C368-T04_good_135.000
SRR6049660Rhizomagastrodiae_C368-T01_good_1107.790
SRR6049661Rhizomagastrodiae_C368-T04_good_178.090
SRR6049662Rhizomagastrodiae_C368-T01_good_171.950
SRR6049663Rhizomagastrodiae_C368-T01_good_1112.140
SRR6049664Rhizomagastrodiae_C368-T10_good_161.910
SRR6049665Rhizomagastrodiae_C368-T10_good_161.910
SRP279888GastroGastrodia elata tuber 81.69
JuvenJuvenile tuber45.39
Mother_GastroMother tuber of Gastrodia elata 7.65
Mother_JuvenMother tuber of Juvenile 11.45