Detail information of GWHGAAEX002007/evm.TU.scaffold_115.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743786819|ref|XP_010922265.1|9.73E-51PREDICTED: pathogenesis-related protein 1-like [Elaeis guineensis]
Swissprottr|Q05736|PR1_ASPOF1.00E-52Pathogenesis-related protein 1
trEMBLtr|Q9SB87|Q9SB87_ASPOF5.00E-51Intracellular pathogenesis-related protein, isoform 6 {ECO:0000313|EMBL:CAA10720.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000116498563499465-
Transcript Sequence

Network for GWHGAAEX002007

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00407.18Bet_v_111562.90E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006952Biological Processdefense response
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0004864Molecular Functionprotein phosphatase inhibitor activity
GO:0038023Molecular Functionsignaling receptor activity
GO:0010427Molecular Functionabscisic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.390
SRR2545915Juvenile tuber43.310
SRP108465SRR5643513five period of Gastrodia elata164.270
SRR5643514five period of Gastrodia elata268.320
SRR5643515five period of Gastrodia elata116.820
SRR5643524five period of Gastrodia elata236.840
SRR5643525five period of Gastrodia elata89.580
SRR5643528five period of Gastrodia elata30.240
SRR5643658five period of Gastrodia elata75.910
SRR5643659five period of Gastrodia elata126.740
SRR5643660five period of Gastrodia elata65.150
SRR5643661five period of Gastrodia elata112.880
SRR5643662five period of Gastrodia elata48.020
SRR5643663five period of Gastrodia elata54.190
SRR5643664five period of Gastrodia elata46.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1102.620
SRR6049655Rhizomagastrodiae_C368-T10_good_1144.290
SRR6049656Rhizomagastrodiae_C368-T07_good_1137.430
SRR6049657Rhizomagastrodiae_C368-T07_good_1108.160
SRR6049658Rhizomagastrodiae_C368-T04_good_148.470
SRR6049659Rhizomagastrodiae_C368-T04_good_133.950
SRR6049660Rhizomagastrodiae_C368-T01_good_141.060
SRR6049661Rhizomagastrodiae_C368-T04_good_195.810
SRR6049662Rhizomagastrodiae_C368-T01_good_181.190
SRR6049663Rhizomagastrodiae_C368-T01_good_127.930
SRR6049664Rhizomagastrodiae_C368-T10_good_1310.980
SRR6049665Rhizomagastrodiae_C368-T10_good_1310.980
SRP279888GastroGastrodia elata tuber 12.48
JuvenJuvenile tuber36.77
Mother_GastroMother tuber of Gastrodia elata 1.42
Mother_JuvenMother tuber of Juvenile 10.60