Detail information of GWHGAAEX002009/evm.TU.scaffold_115.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695029208|ref|XP_009402010.1|1.73E-60PREDICTED: protein YABBY 7-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LDT3|YAB4_ARATH3.00E-47Axial regulator YABBY 4
trEMBLtr|M0T136|M0T136_MUSAM8.00E-65Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P23610_001}
TAIRAT1G234203.00E-39Plant-specific transcription factor YABBY family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000116578710581895+
Transcript Sequence

Network for GWHGAAEX002009

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04690.12YABBY151745.90E-56
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-YABBY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007275Biological Processmulticellular organism development

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.390
SRR2545915Juvenile tuber0.780
SRP108465SRR5643513five period of Gastrodia elata0.410
SRR5643514five period of Gastrodia elata0.860
SRR5643515five period of Gastrodia elata0.680
SRR5643524five period of Gastrodia elata0.740
SRR5643525five period of Gastrodia elata0.080
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.200
SRR5643660five period of Gastrodia elata0.070
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.830
SRR6049655Rhizomagastrodiae_C368-T10_good_10.750
SRR6049656Rhizomagastrodiae_C368-T07_good_13.050
SRR6049657Rhizomagastrodiae_C368-T07_good_12.070
SRR6049658Rhizomagastrodiae_C368-T04_good_11.540
SRR6049659Rhizomagastrodiae_C368-T04_good_11.320
SRR6049660Rhizomagastrodiae_C368-T01_good_10.490
SRR6049661Rhizomagastrodiae_C368-T04_good_13.670
SRR6049662Rhizomagastrodiae_C368-T01_good_11.460
SRR6049663Rhizomagastrodiae_C368-T01_good_11.110
SRR6049664Rhizomagastrodiae_C368-T10_good_10.610
SRR6049665Rhizomagastrodiae_C368-T10_good_10.610
SRP279888GastroGastrodia elata tuber 0.23
JuvenJuvenile tuber0.58
Mother_GastroMother tuber of Gastrodia elata 0.23
Mother_JuvenMother tuber of Juvenile 0.45