Detail information of GWHGAAEX002017/evm.TU.scaffold_115.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|719990081|ref|XP_010252851.1|3.29E-16PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540 isoform X2 [Nelumbo nucifera]
Swissprottr|C0LGR3|Y4265_ARATH3.00E-14Probable LRR receptor-like serine/threonine-protein kinase At4g26540 (Precursor)
trEMBLtr|A0A078EWW3|A0A078EWW3_BRANA6.00E-16BnaC02g12590D protein {ECO:0000313|EMBL:CDY06535.1}
TAIRAT5G560407.00E-17Leucine-rich receptor-like protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000116779443780775-
Transcript Sequence

Network for GWHGAAEX002017

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.890
SRR2545915Juvenile tuber3.730
SRP108465SRR5643513five period of Gastrodia elata4.140
SRR5643514five period of Gastrodia elata3.760
SRR5643515five period of Gastrodia elata3.460
SRR5643524five period of Gastrodia elata4.550
SRR5643525five period of Gastrodia elata3.530
SRR5643528five period of Gastrodia elata5.050
SRR5643658five period of Gastrodia elata6.040
SRR5643659five period of Gastrodia elata8.180
SRR5643660five period of Gastrodia elata9.210
SRR5643661five period of Gastrodia elata7.820
SRR5643662five period of Gastrodia elata4.860
SRR5643663five period of Gastrodia elata7.450
SRR5643664five period of Gastrodia elata5.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.690
SRR6049655Rhizomagastrodiae_C368-T10_good_12.130
SRR6049656Rhizomagastrodiae_C368-T07_good_12.600
SRR6049657Rhizomagastrodiae_C368-T07_good_15.000
SRR6049658Rhizomagastrodiae_C368-T04_good_11.170
SRR6049659Rhizomagastrodiae_C368-T04_good_13.200
SRR6049660Rhizomagastrodiae_C368-T01_good_12.910
SRR6049661Rhizomagastrodiae_C368-T04_good_10.840
SRR6049662Rhizomagastrodiae_C368-T01_good_11.580
SRR6049663Rhizomagastrodiae_C368-T01_good_11.240
SRR6049664Rhizomagastrodiae_C368-T10_good_13.780
SRR6049665Rhizomagastrodiae_C368-T10_good_13.780
SRP279888GastroGastrodia elata tuber 1.26
JuvenJuvenile tuber2.53
Mother_GastroMother tuber of Gastrodia elata 4.21
Mother_JuvenMother tuber of Juvenile 3.15