Detail information of GWHGAAEX002037/evm.TU.scaffold_115.64


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|212638596|ref|YP_002315116.1|7.00E-62uridine kinase [Anoxybacillus flavithermus WK1]
KOGKOG42030Armadillo/beta-Catenin/plakoglobin
nrgi|672141490|ref|XP_008794574.1|0PREDICTED: uridine kinase-like protein 1, chloroplastic [Phoenix dactylifera]
Swissprottr|Q9FKS0|UKL1_ARATH0Putative uracil phosphoribosyltransferase (Precursor)
trEMBLtr|M0T1I9|M0T1I9_MUSAM0Uridine kinase {ECO:0000256|RuleBase:RU003825}
TAIRAT5G408700uridine kinase/uracil phosphoribosyltransferase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011611194741160042-
Transcript Sequence

Network for GWHGAAEX002037

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00485.17PRK562421.10E-50
PF14681.5UPRTase2724733.20E-72
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00876udk, UCK Metabolic pathways map01100
Pyrimidine metabolismmap00240
Drug metabolism - other enzymesmap00983

Gene Ontology

GO term OntologyName
GO:0009116Biological Processnucleoside metabolic process
GO:0016301Molecular Functionkinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.150
SRR2545915Juvenile tuber18.560
SRP108465SRR5643513five period of Gastrodia elata12.710
SRR5643514five period of Gastrodia elata13.920
SRR5643515five period of Gastrodia elata13.500
SRR5643524five period of Gastrodia elata14.900
SRR5643525five period of Gastrodia elata10.880
SRR5643528five period of Gastrodia elata10.540
SRR5643658five period of Gastrodia elata10.970
SRR5643659five period of Gastrodia elata10.720
SRR5643660five period of Gastrodia elata10.470
SRR5643661five period of Gastrodia elata10.580
SRR5643662five period of Gastrodia elata11.990
SRR5643663five period of Gastrodia elata12.180
SRR5643664five period of Gastrodia elata12.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.600
SRR6049655Rhizomagastrodiae_C368-T10_good_118.520
SRR6049656Rhizomagastrodiae_C368-T07_good_116.720
SRR6049657Rhizomagastrodiae_C368-T07_good_116.580
SRR6049658Rhizomagastrodiae_C368-T04_good_116.670
SRR6049659Rhizomagastrodiae_C368-T04_good_117.410
SRR6049660Rhizomagastrodiae_C368-T01_good_113.560
SRR6049661Rhizomagastrodiae_C368-T04_good_118.270
SRR6049662Rhizomagastrodiae_C368-T01_good_115.220
SRR6049663Rhizomagastrodiae_C368-T01_good_114.320
SRR6049664Rhizomagastrodiae_C368-T10_good_117.940
SRR6049665Rhizomagastrodiae_C368-T10_good_117.940
SRP279888GastroGastrodia elata tuber 16.29
JuvenJuvenile tuber14.22
Mother_GastroMother tuber of Gastrodia elata 10.57
Mother_JuvenMother tuber of Juvenile 10.09