Detail information of GWHGAAEX002040/evm.TU.scaffold_115.67


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|389867082|ref|YP_006369323.1|2.00E-29Fatty acid desaturase [Modestobacter marinus]
nrgi|695049617|ref|XP_009412751.1|0PREDICTED: acyl-[acyl-carrier-protein] desaturase, chloroplastic [Musa acuminata subsp. malaccensis]
Swissprottr|E3PZR9|STAD3_OPHSP0Acyl-[acyl-carrier-protein] desaturase 3, chloroplastic (Precursor)
trEMBLtr|W9S4A0|W9S4A0_9ROSA0Acyl-[acyl-carrier-protein] desaturase {ECO:0000256|RuleBase:RU000582}
TAIRAT2G437100Plant stearoyl-acyl-carrier-protein desaturase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011611864411191094+
Transcript Sequence

Network for GWHGAAEX002040

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03405.13FA_desaturase_243291.00E-154
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K03921FAB2, SSI2, desA1 Metabolic pathways map01100
Fatty acid metabolismmap01212
Fatty acid biosynthesismap00061
Biosynthesis of unsaturated fatty acidsmap01040

Gene Ontology

GO term OntologyName
GO:0006631Biological Processfatty acid metabolic process
GO:0006633Biological Processfatty acid biosynthetic process
GO:0055114Biological Processoxidation-reduction process
GO:0045300Molecular Functionacyl-[acyl-carrier-protein] desaturase activity
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.330
SRR2545915Juvenile tuber11.440
SRP108465SRR5643513five period of Gastrodia elata43.810
SRR5643514five period of Gastrodia elata44.820
SRR5643515five period of Gastrodia elata51.420
SRR5643524five period of Gastrodia elata102.140
SRR5643525five period of Gastrodia elata27.100
SRR5643528five period of Gastrodia elata23.670
SRR5643658five period of Gastrodia elata5.770
SRR5643659five period of Gastrodia elata13.570
SRR5643660five period of Gastrodia elata8.960
SRR5643661five period of Gastrodia elata6.510
SRR5643662five period of Gastrodia elata15.220
SRR5643663five period of Gastrodia elata15.550
SRR5643664five period of Gastrodia elata6.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.860
SRR6049655Rhizomagastrodiae_C368-T10_good_139.560
SRR6049656Rhizomagastrodiae_C368-T07_good_111.840
SRR6049657Rhizomagastrodiae_C368-T07_good_15.450
SRR6049658Rhizomagastrodiae_C368-T04_good_15.670
SRR6049659Rhizomagastrodiae_C368-T04_good_12.970
SRR6049660Rhizomagastrodiae_C368-T01_good_110.340
SRR6049661Rhizomagastrodiae_C368-T04_good_19.840
SRR6049662Rhizomagastrodiae_C368-T01_good_179.320
SRR6049663Rhizomagastrodiae_C368-T01_good_178.270
SRR6049664Rhizomagastrodiae_C368-T10_good_117.270
SRR6049665Rhizomagastrodiae_C368-T10_good_117.270
SRP279888GastroGastrodia elata tuber 245.44
JuvenJuvenile tuber1,309.18
Mother_GastroMother tuber of Gastrodia elata 2,936.48
Mother_JuvenMother tuber of Juvenile 2,030.02