Detail information of GWHGAAEX002041/evm.TU.scaffold_115.68
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|83591027|ref|YP_431036.1| | 3.00E-27 | Acyl-ACP thioesterase [Moorella thermoacetica ATCC 39073] |
| nr | gi|672164708|ref|XP_008802240.1| | 2.32E-178 | PREDICTED: oleoyl-acyl carrier protein thioesterase, chloroplastic-like [Phoenix dactylifera] |
| Swissprot | tr|Q9SV64|FATA2_ARATH | 1.00E-162 | Oleoyl-acyl carrier protein thioesterase 2, chloroplastic (Precursor) |
| trEMBL | tr|M0TNS2|M0TNS2_MUSAM | 7.00E-175 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P08690_001} |
| TAIR | AT4G13050 | 4.00E-162 | Acyl-ACP thioesterase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000116 | 1191398 | 1222597 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002041
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01643.16 | Acyl-ACP_TE | 158 | 439 | 9.90E-98 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K10782 | FATA | Fatty acid biosynthesis | map00061 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006633 | Biological Process | fatty acid biosynthetic process |
| GO:0016790 | Molecular Function | thiolester hydrolase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.330 |
| SRR2545915 | Juvenile tuber | 19.130 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 19.300 |
| SRR5643514 | five period of Gastrodia elata | 20.390 | |
| SRR5643515 | five period of Gastrodia elata | 17.160 | |
| SRR5643524 | five period of Gastrodia elata | 17.400 | |
| SRR5643525 | five period of Gastrodia elata | 19.150 | |
| SRR5643528 | five period of Gastrodia elata | 19.610 | |
| SRR5643658 | five period of Gastrodia elata | 16.980 | |
| SRR5643659 | five period of Gastrodia elata | 18.100 | |
| SRR5643660 | five period of Gastrodia elata | 14.760 | |
| SRR5643661 | five period of Gastrodia elata | 18.070 | |
| SRR5643662 | five period of Gastrodia elata | 21.130 | |
| SRR5643663 | five period of Gastrodia elata | 19.100 | |
| SRR5643664 | five period of Gastrodia elata | 17.730 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.350 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 13.910 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.420 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 14.670 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 17.410 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 17.320 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 16.240 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 14.710 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 22.520 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 19.150 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 17.210 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 17.210 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 21.38 |
| Juven | Juvenile tuber | 17.71 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 20.32 | |
| Mother_Juven | Mother tuber of Juvenile | 13.19 |