Detail information of GWHGAAEX002050/evm.TU.scaffold_115.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428780246|ref|YP_007172032.1|1.00E-39GTP cyclohydrolase I [Dactylococcopsis salina PCC 8305]
KOGKOG26981.00E-144GTP cyclohydrolase I
nrgi|743870986|ref|XP_010906179.1|0PREDICTED: GTP cyclohydrolase 1-like [Elaeis guineensis]
Swissprottr|Q8VYU3|GCH1_SOLLC2.00E-157GTP cyclohydrolase 1 {ECO:0000305}
trEMBLtr|K3Z5X1|K3Z5X1_SETIT1.00E-174Uncharacterized protein {ECO:0000313|EnsemblPlants:Si021939m}
TAIRAT3G072701.00E-144GTP cyclohydrolase I

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011613335951352585-
Transcript Sequence

Network for GWHGAAEX002050

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01227.21GTP_cyclohydroI371863.50E-36
PF01227.21GTP_cyclohydroI2634413.00E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01495GCH1, folE Metabolic pathways map01100
Folate biosynthesismap00790

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.220
SRR2545915Juvenile tuber13.610
SRP108465SRR5643513five period of Gastrodia elata14.100
SRR5643514five period of Gastrodia elata10.400
SRR5643515five period of Gastrodia elata33.140
SRR5643524five period of Gastrodia elata14.130
SRR5643525five period of Gastrodia elata18.620
SRR5643528five period of Gastrodia elata114.670
SRR5643658five period of Gastrodia elata21.820
SRR5643659five period of Gastrodia elata43.940
SRR5643660five period of Gastrodia elata25.990
SRR5643661five period of Gastrodia elata33.540
SRR5643662five period of Gastrodia elata52.130
SRR5643663five period of Gastrodia elata30.050
SRR5643664five period of Gastrodia elata39.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.110
SRR6049655Rhizomagastrodiae_C368-T10_good_18.120
SRR6049656Rhizomagastrodiae_C368-T07_good_19.170
SRR6049657Rhizomagastrodiae_C368-T07_good_19.870
SRR6049658Rhizomagastrodiae_C368-T04_good_110.340
SRR6049659Rhizomagastrodiae_C368-T04_good_18.900
SRR6049660Rhizomagastrodiae_C368-T01_good_111.660
SRR6049661Rhizomagastrodiae_C368-T04_good_19.060
SRR6049662Rhizomagastrodiae_C368-T01_good_19.890
SRR6049663Rhizomagastrodiae_C368-T01_good_112.860
SRR6049664Rhizomagastrodiae_C368-T10_good_18.960
SRR6049665Rhizomagastrodiae_C368-T10_good_18.960
SRP279888GastroGastrodia elata tuber 17.55
JuvenJuvenile tuber15.10
Mother_GastroMother tuber of Gastrodia elata 43.95
Mother_JuvenMother tuber of Juvenile 72.26