Detail information of GWHGAAEX002053/evm.TU.scaffold_115.79


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672141639|ref|XP_008794655.1|4.17E-94PREDICTED: protein TIC 22-like, chloroplastic [Phoenix dactylifera]
Swissprottr|F4J469|TI22L_ARATH8.00E-77Protein TIC 22-like, chloroplastic (Precursor)
trEMBLtr|M5XLW7|M5XLW7_PRUPE1.00E-87Uncharacterized protein {ECO:0000313|EMBL:EMJ22498.1} (Fragment)
TAIRAT3G237103.00E-76Tic22-like family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011614339611446272-
Transcript Sequence

Network for GWHGAAEX002053

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04278.11Tic22892985.40E-73
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0015031Biological Processprotein transport

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.390
SRR2545915Juvenile tuber18.370
SRP108465SRR5643513five period of Gastrodia elata15.220
SRR5643514five period of Gastrodia elata10.430
SRR5643515five period of Gastrodia elata11.090
SRR5643524five period of Gastrodia elata11.180
SRR5643525five period of Gastrodia elata10.150
SRR5643528five period of Gastrodia elata9.820
SRR5643658five period of Gastrodia elata7.830
SRR5643659five period of Gastrodia elata20.960
SRR5643660five period of Gastrodia elata17.090
SRR5643661five period of Gastrodia elata22.670
SRR5643662five period of Gastrodia elata20.110
SRR5643663five period of Gastrodia elata16.130
SRR5643664five period of Gastrodia elata15.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.510
SRR6049655Rhizomagastrodiae_C368-T10_good_118.740
SRR6049656Rhizomagastrodiae_C368-T07_good_117.580
SRR6049657Rhizomagastrodiae_C368-T07_good_114.210
SRR6049658Rhizomagastrodiae_C368-T04_good_113.780
SRR6049659Rhizomagastrodiae_C368-T04_good_112.230
SRR6049660Rhizomagastrodiae_C368-T01_good_113.890
SRR6049661Rhizomagastrodiae_C368-T04_good_116.790
SRR6049662Rhizomagastrodiae_C368-T01_good_117.440
SRR6049663Rhizomagastrodiae_C368-T01_good_116.810
SRR6049664Rhizomagastrodiae_C368-T10_good_116.120
SRR6049665Rhizomagastrodiae_C368-T10_good_116.120
SRP279888GastroGastrodia elata tuber 17.51
JuvenJuvenile tuber14.58
Mother_GastroMother tuber of Gastrodia elata 11.95
Mother_JuvenMother tuber of Juvenile 11.71