Detail information of GWHGAAEX002056/evm.TU.scaffold_115.82


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG19872.00E-39Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains
nrgi|641834171|gb|KDO53172.1|2.62E-50hypothetical protein CISIN_1g021574mg [Citrus sinensis]
Swissprottr|Q84WU2|UBP13_ARATH2.00E-15Ubiquitin carboxyl-terminal hydrolase 13
trEMBLtr|A0A067EPS6|A0A067EPS6_CITSI1.00E-50Uncharacterized protein {ECO:0000313|EMBL:KDO53172.1}
TAIRAT3G173802.00E-39TRAF-like family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011615208711525595+
Transcript Sequence

Network for GWHGAAEX002056

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00917.25MATH962174.70E-06
PF00917.25MATH2443692.50E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.910
SRR2545915Juvenile tuber81.560
SRP108465SRR5643513five period of Gastrodia elata66.290
SRR5643514five period of Gastrodia elata46.220
SRR5643515five period of Gastrodia elata32.970
SRR5643524five period of Gastrodia elata63.190
SRR5643525five period of Gastrodia elata15.370
SRR5643528five period of Gastrodia elata0.900
SRR5643658five period of Gastrodia elata3.610
SRR5643659five period of Gastrodia elata11.180
SRR5643660five period of Gastrodia elata12.780
SRR5643661five period of Gastrodia elata4.870
SRR5643662five period of Gastrodia elata16.330
SRR5643663five period of Gastrodia elata16.270
SRR5643664five period of Gastrodia elata9.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.320
SRR6049655Rhizomagastrodiae_C368-T10_good_132.240
SRR6049656Rhizomagastrodiae_C368-T07_good_120.740
SRR6049657Rhizomagastrodiae_C368-T07_good_115.740
SRR6049658Rhizomagastrodiae_C368-T04_good_19.050
SRR6049659Rhizomagastrodiae_C368-T04_good_18.120
SRR6049660Rhizomagastrodiae_C368-T01_good_111.190
SRR6049661Rhizomagastrodiae_C368-T04_good_116.650
SRR6049662Rhizomagastrodiae_C368-T01_good_134.290
SRR6049663Rhizomagastrodiae_C368-T01_good_112.910
SRR6049664Rhizomagastrodiae_C368-T10_good_131.080
SRR6049665Rhizomagastrodiae_C368-T10_good_131.080
SRP279888GastroGastrodia elata tuber 7.78
JuvenJuvenile tuber1.93
Mother_GastroMother tuber of Gastrodia elata 173.66
Mother_JuvenMother tuber of Juvenile 66.13