Detail information of GWHGAAEX002058/evm.TU.scaffold_115.84


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|18978179|ref|NP_579536.1|1.00E-1950S ribosomal protein L32 [Pyrococcus furiosus DSM 3638]
KOGKOG08788.00E-8260S ribosomal protein L32
nrgi|573954713|ref|XP_006659599.1|4.56E-87PREDICTED: 60S ribosomal protein L32-1-like [Oryza brachyantha]
Swissprottr|P49211|RL321_ARATH2.00E-8260S ribosomal protein L32-1
trEMBLtr|B8B8V1|B8B8V1_ORYSI2.00E-87Putative uncharacterized protein {ECO:0000313|EMBL:EEC83908.1}
TAIRAT4G181008.00E-82Ribosomal protein L32e

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011615353441540761-
Transcript Sequence

Network for GWHGAAEX002058

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01655.17Ribosomal_L32e161222.00E-49
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02912RP-L32e, RPL32 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms654.630
SRR2545915Juvenile tuber752.530
SRP108465SRR5643513five period of Gastrodia elata785.780
SRR5643514five period of Gastrodia elata879.600
SRR5643515five period of Gastrodia elata819.540
SRR5643524five period of Gastrodia elata826.370
SRR5643525five period of Gastrodia elata677.440
SRR5643528five period of Gastrodia elata484.130
SRR5643658five period of Gastrodia elata478.090
SRR5643659five period of Gastrodia elata1248.140
SRR5643660five period of Gastrodia elata1457.700
SRR5643661five period of Gastrodia elata1572.360
SRR5643662five period of Gastrodia elata1578.660
SRR5643663five period of Gastrodia elata1460.110
SRR5643664five period of Gastrodia elata1824.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1700.000
SRR6049655Rhizomagastrodiae_C368-T10_good_1699.540
SRR6049656Rhizomagastrodiae_C368-T07_good_1717.570
SRR6049657Rhizomagastrodiae_C368-T07_good_1720.370
SRR6049658Rhizomagastrodiae_C368-T04_good_1490.430
SRR6049659Rhizomagastrodiae_C368-T04_good_1445.550
SRR6049660Rhizomagastrodiae_C368-T01_good_1572.000
SRR6049661Rhizomagastrodiae_C368-T04_good_1530.810
SRR6049662Rhizomagastrodiae_C368-T01_good_1740.940
SRR6049663Rhizomagastrodiae_C368-T01_good_1659.510
SRR6049664Rhizomagastrodiae_C368-T10_good_1889.150
SRR6049665Rhizomagastrodiae_C368-T10_good_1889.150
SRP279888GastroGastrodia elata tuber 1,144.03
JuvenJuvenile tuber940.48
Mother_GastroMother tuber of Gastrodia elata 327.17
Mother_JuvenMother tuber of Juvenile 472.49