Detail information of GWHGAAEX002060/evm.TU.scaffold_115.87


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|116490554|ref|YP_810098.1|7.00E-18D-xylose proton-symporter [Oenococcus oeni PSU-1]
KOGKOG02557.00E-139Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily)
nrgi|567859230|ref|XP_006422298.1|2.18E-151hypothetical protein CICLE_v10004786mg [Citrus clementina]
Swissprottr|Q9SA38|OCT3_ARATH2.00E-139Organic cation/carnitine transporter 3
trEMBLtr|A0A067FE74|A0A067FE74_CITSI8.00E-152Uncharacterized protein {ECO:0000313|EMBL:KDO61526.1}
TAIRAT1G163907.00E-139organic cation/carnitine transporter 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011615868771588472-
Transcript Sequence

Network for GWHGAAEX002060

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00083.23Sugar_tr1355099.80E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0022857Molecular Functiontransmembrane transporter activity
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.060
SRP108465SRR5643513five period of Gastrodia elata0.200
SRR5643514five period of Gastrodia elata3.120
SRR5643515five period of Gastrodia elata0.900
SRR5643524five period of Gastrodia elata2.580
SRR5643525five period of Gastrodia elata0.100
SRR5643528five period of Gastrodia elata0.210
SRR5643658five period of Gastrodia elata0.660
SRR5643659five period of Gastrodia elata0.330
SRR5643660five period of Gastrodia elata0.180
SRR5643661five period of Gastrodia elata0.050
SRR5643662five period of Gastrodia elata0.270
SRR5643663five period of Gastrodia elata0.350
SRR5643664five period of Gastrodia elata0.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.130
SRR6049655Rhizomagastrodiae_C368-T10_good_10.100
SRR6049656Rhizomagastrodiae_C368-T07_good_10.070
SRR6049657Rhizomagastrodiae_C368-T07_good_10.070
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.050
SRR6049660Rhizomagastrodiae_C368-T01_good_10.070
SRR6049661Rhizomagastrodiae_C368-T04_good_10.090
SRR6049662Rhizomagastrodiae_C368-T01_good_10.270
SRR6049663Rhizomagastrodiae_C368-T01_good_10.130
SRR6049664Rhizomagastrodiae_C368-T10_good_10.060
SRR6049665Rhizomagastrodiae_C368-T10_good_10.060
SRP279888GastroGastrodia elata tuber 0.32
JuvenJuvenile tuber0.26
Mother_GastroMother tuber of Gastrodia elata 1.68
Mother_JuvenMother tuber of Juvenile 0.83