Detail information of GWHGAAEX002061/evm.TU.scaffold_115.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|390954111|ref|YP_006417869.1|4.00E-103branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Aequorivita sublithincola DSM 14238]
KOGKOG09750Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily
nrgi|695059135|ref|XP_009417913.1|0PREDICTED: branched-chain-amino-acid aminotransferase-like protein 1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9ASR4|BCAL2_ARATH0Branched-chain-amino-acid aminotransferase-like protein 2
trEMBLtr|M0U153|M0U153_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P17460_001}
TAIRAT3G051900D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011616314511684829+
Transcript Sequence

Network for GWHGAAEX002061

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01063.18Aminotran_42905144.10E-40
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.860
SRR2545915Juvenile tuber51.380
SRP108465SRR5643513five period of Gastrodia elata20.050
SRR5643514five period of Gastrodia elata19.180
SRR5643515five period of Gastrodia elata17.190
SRR5643524five period of Gastrodia elata18.350
SRR5643525five period of Gastrodia elata9.520
SRR5643528five period of Gastrodia elata6.820
SRR5643658five period of Gastrodia elata8.390
SRR5643659five period of Gastrodia elata27.480
SRR5643660five period of Gastrodia elata24.580
SRR5643661five period of Gastrodia elata22.440
SRR5643662five period of Gastrodia elata28.510
SRR5643663five period of Gastrodia elata23.570
SRR5643664five period of Gastrodia elata28.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_155.590
SRR6049655Rhizomagastrodiae_C368-T10_good_126.140
SRR6049656Rhizomagastrodiae_C368-T07_good_149.560
SRR6049657Rhizomagastrodiae_C368-T07_good_162.660
SRR6049658Rhizomagastrodiae_C368-T04_good_1103.350
SRR6049659Rhizomagastrodiae_C368-T04_good_1115.230
SRR6049660Rhizomagastrodiae_C368-T01_good_171.430
SRR6049661Rhizomagastrodiae_C368-T04_good_181.260
SRR6049662Rhizomagastrodiae_C368-T01_good_152.400
SRR6049663Rhizomagastrodiae_C368-T01_good_165.900
SRR6049664Rhizomagastrodiae_C368-T10_good_132.770
SRR6049665Rhizomagastrodiae_C368-T10_good_132.770
SRP279888GastroGastrodia elata tuber 58.91
JuvenJuvenile tuber20.03
Mother_GastroMother tuber of Gastrodia elata 10.75
Mother_JuvenMother tuber of Juvenile 14.92