Detail information of GWHGAAEX002064/evm.TU.scaffold_115.91


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743815232|ref|XP_010930280.1|0PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Elaeis guineensis]
Swissprottr|Q9SSQ4|FRS6_ARATH1.00E-129Protein FAR1-RELATED SEQUENCE 6
trEMBLtr|M7YDI4|M7YDI4_TRIUA0Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_03147-P1}
TAIRAT1G525205.00E-129FAR1-related sequence 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011617822791808126-
Transcript Sequence

Network for GWHGAAEX002064

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03101.14FAR1841675.70E-17
PF10551.8MULE2673591.40E-27
PF04434.16SWIM5565864.00E-05
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyFAR1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms39.320
SRR2545915Juvenile tuber27.140
SRP108465SRR5643513five period of Gastrodia elata18.480
SRR5643514five period of Gastrodia elata15.120
SRR5643515five period of Gastrodia elata15.720
SRR5643524five period of Gastrodia elata16.910
SRR5643525five period of Gastrodia elata16.960
SRR5643528five period of Gastrodia elata14.930
SRR5643658five period of Gastrodia elata22.090
SRR5643659five period of Gastrodia elata16.720
SRR5643660five period of Gastrodia elata17.960
SRR5643661five period of Gastrodia elata14.730
SRR5643662five period of Gastrodia elata19.320
SRR5643663five period of Gastrodia elata18.350
SRR5643664five period of Gastrodia elata18.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.580
SRR6049655Rhizomagastrodiae_C368-T10_good_119.960
SRR6049656Rhizomagastrodiae_C368-T07_good_122.530
SRR6049657Rhizomagastrodiae_C368-T07_good_134.650
SRR6049658Rhizomagastrodiae_C368-T04_good_130.870
SRR6049659Rhizomagastrodiae_C368-T04_good_135.880
SRR6049660Rhizomagastrodiae_C368-T01_good_128.240
SRR6049661Rhizomagastrodiae_C368-T04_good_128.020
SRR6049662Rhizomagastrodiae_C368-T01_good_119.680
SRR6049663Rhizomagastrodiae_C368-T01_good_122.060
SRR6049664Rhizomagastrodiae_C368-T10_good_115.970
SRR6049665Rhizomagastrodiae_C368-T10_good_115.970
SRP279888GastroGastrodia elata tuber 17.28
JuvenJuvenile tuber22.13
Mother_GastroMother tuber of Gastrodia elata 27.57
Mother_JuvenMother tuber of Juvenile 31.52