Gene detail

Detail information of GWHGAAEX002065/evm.TU.scaffold_115.92

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|124267629\|ref\|YP_001021633.1\|	2.00E-28	lipase [Methylibium petroleiphilum PM1]
KOG	KOG1515	0	Arylacetamide deacetylase
nr	gi\|743865467\|ref\|XP_010904836.1\|	0	PREDICTED: gibberellin receptor GID1C-like [Elaeis guineensis]
Swissprot	tr\|Q940G6\|GID1C_ARATH	0	Gibberellin receptor GID1C
trEMBL	tr\|B9I826\|B9I826_POPTR	0	Uncharacterized protein {ECO:0000313\|EMBL:EEE95499.1}
TAIR	AT5G27320	0	alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000116	1810409	1813332	+

Transcript Sequence
>GWHTAAEX002065 GAGAGAGAGAGAGAGAGAGAGAAGCGTCTCGCCATGGCCGGAAGCAACGAGGTTAACGCGAACGAGTCAAAGACGGTGGTTCCCCTCAACACCTGGGTTCTGATCTCCAACTTCAAGGTAGCCTACACGATGCTCCGCAGGCCAGACGGAAGCTTCGACCGACACCTGGCAGAGTTCCTGGATCGAAAAGTACCGGCCAGCTCCTCCCCCGTCGACGGAGTCATCTCCTTCGACGTTCTGCTCGACCGGCTCTCGAACCTTCTGGCAAGAATCTACCGCCCAGCTCCGGCCCCATCCAACGACCAAACCCCCCAAAAGTCTCTCCTTTCTGACCTCCAGCGCCCTCCTTCGGCGGACCCGTTTCCGGTGATCATCTTCTTCCATGGCGGCAGCTTCGCCCACTCCTCCTCCAACAGCGCAATCTACGACACCCTCTGCCGCCGCTTCGTCAATCTCTGTGGAGGCGCCGTCGTCATCTCCGTCAATTACCGGAGATCCCCCGAGTTCCGCTTTCCCTGCGCGTACGACGACGGCTGGACCGCCCTGAAGTGGGCCTCTTCTCAGCCCTGGCTGCGCAGCGGGGAGGACTCCAAGCTCCGCGTTTTCCTCTCAGGTGACAGCTCGGGCGGCAACATCGCCCACCACGTCGCCCTCAGAGCGGTGGAATCCGGCATCCGGATCTCGGGGAACATCCTGGTGAATCCGTTGTTCGGAGGGAAGGAGAGGACGGAATCCGAGCTGAAATTGGATGGGAAGTACTTTGTGGTGCTCAAGGATCGGGATTGGTATTGGAAGGCCTTCCTCCCCGAAGGGGCTGATCGAGATCACCCTGCCTGCAATCCCTTTGGCCCCAACGGCGTCGCGCTCCAGGGGCTTCCCTTCCCTAAGACCCTTCTGGCTGTGGCCAGCTTAGATCCCACGCAGGAGTGGCAGCTCGCTTATGCGGAGGGGCTCAGGAAGGCAGGCCACAACGTTCGCCTCATCTATCGAGAGAAGGCCACAATCGGATTCTACTTCCTGCCCAACACCAACCACTATCATGAGGTCATGCGGGAGATCCGAGATTTCGTCAGCTCGAACTGTTAGCAGCAGCATTGCATCTTCAAGTATATGTTTCACTTGCTCTTTTCTCTGATTGATTATATAGGTGATTGTTTCTTCTAATGCTTTTGGTTGAGGACGGTTTACTACTTCTCTGGAAAAACAAAAAGAAGTGATTTCGCAGCTGCAGTTGGCTTCTTTTGGACAACATCGGAGAATGGTTTATTTGTATACTGCTGATTAATTGCAGCCATAACATGGCTGAAAAAATCAAAAGATGTGATTTTACAGCTGTATTGAGCTTCTTTTGGATGACATTGGAGATTGATTTATATATACCGCTGCTATGAACGATAATCACAGCAGGATGTGATTTATTGTTGCTCTGCTAATTTTGTATATTGTAATTAATTACAGCCATAAGTAGTTACAGAAAAACAAAAGAACTGATTTTGCAGCTGCAATGAGCTTCTTTTAGACAGCATTGGACAATGATTATCACAGCTGGAGGGGAGGGATTTGATGCTATCTGCTAATATTGTATCCTGCTGATTAATTACAGTCATAACATAGTTGGAAAAAACTAAAGGAGTGATTTTGCAGCTGCAAATGATTTATACCCTGCTGACGATGATGATCACAGCAGGCTGATGATTAATTCGTGCTCTATTTTAGGGAATGGGACCCTCTGCTAATGCTGTTTACTGCTAATTAGTTACAGCTATAACATGGATCATACCACATCTACTCTTCTGTTTAGTTCTGTCTAATTCTTTGGGGAATGCTTCCTGATCCTGCGATTGTATTGATGTTTTAGGCATTACCTGTTTATTTACAAATGTAGCACAATATAGCCAAAACTCAATGCACTCACAGAACCTACATCATTCAATCCAAATGCATGTATCCGAAATATATCTGGTTCTACTCCATATAAAATACTCCATGCAATATGAGCTTTATTCTTTCATGTAGATTTCATGTAAGTGTTGTTTGTATAAAATAAAATTCTTTTAGGGAAATTGAGGTTTCCTGCCGTTTAGCATAAAACAAAACGGG

Network for GWHGAAEX002065

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07859.12	Abhydrolase_3	113	327	4.90E-53

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14493	GID1	Plant hormone signal transduction	map04075

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	34.980
SRP064423	SRR2545915	Juvenile tuber	22.550
SRP108465	SRR5643513	five period of Gastrodia elata	40.240
	SRR5643514	five period of Gastrodia elata	46.370
	SRR5643515	five period of Gastrodia elata	51.460
	SRR5643524	five period of Gastrodia elata	44.680
	SRR5643525	five period of Gastrodia elata	48.560
	SRR5643528	five period of Gastrodia elata	52.610
	SRR5643658	five period of Gastrodia elata	51.940
	SRR5643659	five period of Gastrodia elata	29.840
	SRR5643660	five period of Gastrodia elata	29.290
	SRR5643661	five period of Gastrodia elata	27.720
	SRR5643662	five period of Gastrodia elata	39.790
	SRR5643663	five period of Gastrodia elata	31.940
	SRR5643664	five period of Gastrodia elata	66.590
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	73.160
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	50.750
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	56.270
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	76.980
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	101.730
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	131.310
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	111.360
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	101.130
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	47.440
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	87.110
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	49.110
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	49.110
SRP279888	Gastro	Gastrodia elata tuber	30.97
	Juven	Juvenile tuber	18.69
	Mother_Gastro	Mother tuber of Gastrodia elata	96.15
	Mother_Juven	Mother tuber of Juvenile	35.23