Detail information of GWHGAAEX002066/evm.TU.scaffold_115.93


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|470182187|ref|YP_007568062.1|7.00E-135Phosphoribosylaminoimidazole-succinocarboxamide synthase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
KOGKOG28353.00E-176Phosphoribosylamidoimidazole-succinocarboxamide synthase
nrgi|743859229|ref|XP_010942644.1|0PREDICTED: phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic isoform X2 [Elaeis guineensis]
Swissprottr|P38025|PUR7_ARATH9.00E-177Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic (Precursor)
trEMBLtr|M0TIU4|M0TIU4_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P19070_001}
TAIRAT3G211103.00E-176purin 7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011618356981874089-
Transcript Sequence

Network for GWHGAAEX002066

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01259.17SAICAR_synt913374.90E-73
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01923purC Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Purine metabolismmap00230

Gene Ontology

GO term OntologyName
GO:0006164Biological Processpurine nucleotide biosynthetic process
GO:0004639Molecular Functionphosphoribosylaminoimidazolesuccinocarboxamide synthase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.530
SRR2545915Juvenile tuber20.100
SRP108465SRR5643513five period of Gastrodia elata12.340
SRR5643514five period of Gastrodia elata14.010
SRR5643515five period of Gastrodia elata11.280
SRR5643524five period of Gastrodia elata12.900
SRR5643525five period of Gastrodia elata5.360
SRR5643528five period of Gastrodia elata3.740
SRR5643658five period of Gastrodia elata3.350
SRR5643659five period of Gastrodia elata12.200
SRR5643660five period of Gastrodia elata12.770
SRR5643661five period of Gastrodia elata13.320
SRR5643662five period of Gastrodia elata14.070
SRR5643663five period of Gastrodia elata12.580
SRR5643664five period of Gastrodia elata14.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.620
SRR6049655Rhizomagastrodiae_C368-T10_good_18.240
SRR6049656Rhizomagastrodiae_C368-T07_good_116.520
SRR6049657Rhizomagastrodiae_C368-T07_good_116.290
SRR6049658Rhizomagastrodiae_C368-T04_good_118.440
SRR6049659Rhizomagastrodiae_C368-T04_good_116.040
SRR6049660Rhizomagastrodiae_C368-T01_good_119.210
SRR6049661Rhizomagastrodiae_C368-T04_good_118.590
SRR6049662Rhizomagastrodiae_C368-T01_good_123.140
SRR6049663Rhizomagastrodiae_C368-T01_good_116.270
SRR6049664Rhizomagastrodiae_C368-T10_good_114.710
SRR6049665Rhizomagastrodiae_C368-T10_good_114.710
SRP279888GastroGastrodia elata tuber 20.86
JuvenJuvenile tuber15.43
Mother_GastroMother tuber of Gastrodia elata 4.96
Mother_JuvenMother tuber of Juvenile 8.42