Gene detail

Detail information of GWHGAAEX002074/evm.TU.scaffold_115.102

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|82701335\|ref\|YP_410901.1\|	2.00E-104	K+ potassium transporter [Nitrosospira multiformis ATCC 25196]
nr	gi\|672164467\|ref\|XP_008802111.1\|	0	PREDICTED: probable potassium transporter 2 isoform X1 [Phoenix dactylifera]
Swissprot	tr\|Q942X8\|HAK2_ORYSJ	0	Probable potassium transporter 2
trEMBL	tr\|A0A068F7G5\|A0A068F7G5_ELAGV	0	Potassium transporter {ECO:0000256\|RuleBase:RU321113}
TAIR	AT3G02050	0	K+ uptake transporter 3

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000116	2071403	2125114	-

Transcript Sequence
>GWHTAAEX002074 GCGGTCACTGTGGTGGCTGTGATTTGCGCGGAGTATGTGGATTGGGATGGCTAGGCTCAGGGCGAGTGGGCGAGGTTGCGGGAGTCGGACATCAGATTTGATGGAACAAAGTAGTCGAGAGTCGATCGTCAGCGAGAACTCTTCGATCCTTCATGCCGCAAATCTTTCGATCTTTTTTCTGCGACTCAACCTAACTGTATAATGAGCAGCGACCATCAACCTCTAACGCTTCACGGGAAAAGTTACTATAACCACCTGCTTCTTTTATCATATCAAAGTTTTGGTGTGGTATACGGTGACTTAGCTACTTCTCCTCTGTATGTCTATAAAAGTACTTTTTCTGAGAGGCTTCATGAATTTCAAAATGAAGAAGCAATATTTGGTGCATTTTCCTTGGTATTCTGGACTTTCACTATGATTCCATTGCTTAAATATGTATTCATTGTGTTGACTGCAGATGATAACGGTGAAGGAGGAACTTTTGCCTTGTACTCTCTTCTTTGCAGACACGCTAAGTTCAGTCTGTTACCTAATCAACAGGCTGCTGATGAGGAATTATCTACATATTACAGACCTGGTTATATTTCTCGGAGTACTGCTTTATCTCCTTTGAAAATATTTTTTGAGAAACATAAGAGGCTGCGAACTGCTTTACTGCTTGTAGTTCTATTTGGTACTTGTATGGTTATAGGTGATGGTGTTCTTACACCTGCAATTTCTGTTCTGGCATCGGTGTCTGGCTTGCAAGTTCGTGTGGAGAGCTTAAGTGATGCTGTGATGGTACTTATATCTTGCATTGTATTAGTTGGCCTTTTTGCTTTGCAACACCGTGGCACTCAAAGGGTAGCCTTCTTGTTTGCACCAATCGTTATTATTTGGCTTTTGTGTATTGCCTTTGTTGGTCTATACAACATCTTCCACTGGAATCCTAGAATATACCGAGCTCTTTCCCCAAGCTACATCATTAAATTCTTCAAGTTGACTGGAAAGAATGGCTGGCTTTCTCTGGGAGGGATATTGCTGTCTATTACAGGTAGTGAAGCTATGTTTGCTGATCTTGGCCATTTCACTGCAGCTTCCATTAGGGTCGCGTTTGTTGCAGTCATATATCCATGCCTAGTGTTACAGTACATGGGACAGGCTGCGTACCTTACTAAAAACGTTTCCTCGGTTCGCATAAGCTTCTATGCATCCATCCCAAGGCCTGTGTTCTGGCCTGTTTTCTTGGTGGCTACTTTAGCTTCCGTAGTGGCTAGCCAGGCTGTCATCTCGGCAACCTTTTCAATTGTTAAACAGTGCCTTTCCTTGGGCTGCTTTCCTCGCGTTAAGATTGTTCATACATCGAGGTGGATTTATGGCCAGATATATATACCTGAAATCAACTGGATTCTTTTGGTGCTCTGCCTTGCTGTCACTATTGGTTTTCAGGATACTACCTTGATTGGAAATGCATATGGCATTGCTTGCATAGCTGTGATGTTCATCACAACATGGTTGATGCCGTTGATCATCATCTTCGTGTGGCAGAAGAACATCATCTTCGCCCTCTCTTTCCTAATCTTCTTTGGGATCATCGAAGCAGTGTACCTATCCTCTTCAATCGTTAAAGTCCCTCGGGGGGGATGGGCCCCTTTGGTGCTCGCATCCATCTTCATGGCTGTCATGTATGTGTGGCACTATGGAACCCGACGGAAGTACATGTTTGACATGCAGAACAAGGTGTCCATGAAATGGCTCCTCACCCTTGGCCCCAACCTGGGCATTGTCCGTGTTCCCGGAATCGGCCTCATCTACACAGAGCTGGTCACCGGCGTCCCCGCTATCTTCTCCCATTTCGTTACGAACCTGCCGGCTTTCCATCAGGTCCTCGTCTTTGTCTGCGTCAAATCAGTGCCGGTGCCGTATGTTCCGGCTGACGAACGGTACCTGATCGGGCGGATTGGCCCCCGAATGTACCGAATGTACAGGTGTATCGTGAGGTACGGATACCAGGACGTGCCCAAGGACGACTACAATTTTGAGGATCAGCTGGTCATGAGCATCGCAGAGTTCATCCAGATGGAAGCCGGGGAGTCATCAAGGGGTTCGGCCAGCTCTGACGCCTCGCCTGACGGAAGGATGGCTGTCATCCGAACCTCAGAGCGGCGCTCCGGCCTGGTGGTGAGGGACGGCAGCGATGTCGAAGCGGCGGAGGGATCATCCGGCATCTTGAGAAGCGTCAAGTCGGAGACCCTGCAGAGTCTGCAGTCGCTGTACGAGCACGAATCTCCAAATCTGAGCCGGAGGCGGCGCGTGCGGTTCGAACTACCGCAGCCCCCACTGCGAACGATAGACGCTCAGGTGTGGGAGGAGCTTGCAGCACTTGTGGACGCCAAGGAGGCGGGGGTGGCCTATGTGCTGGGCCACTCATACATAAAGGCCAGGAAGAACTCGTCCTTTGTGAAGAAGTTTGTCATCGACGTGGTCTACTCTTTCCTTCGGAAGAACTGCAGGGGGCCTTCTGTGGCCCTGAACATTCCTCACATTAGTCTTATTGAAGTGGGAATGATCTACTATGTGTAAGAGGATCATCTTCTCTTTCTGCTGAAGGTATATATGTCTTGGCTGCATTATCTTCTTTGGTTTTTCTCGGTGTATAGTTTACTCTGACTTGTACCTATAACAAGTAGTTAATAAAAACTGGGCATGGTCTCTCAAGATTATTATGGCCAAAATATGCATATGCAAATTGTGTTTATCAAGCAAAGCATTGAAGTTTTTGCTTCCGGAGATGTGTATTGCAGATTTGTCTTGTTTTACAGTTAGCACAGACTGGAAGCTATTCTTAATTTTTAGTTATTAGGGTATTTTTTTACAATTTTTGGGTTAGGCATGGGCCTAAGTACCATTTAATGGTCTTTAAGATAAGCCATTTTCGTGCTGTATATTACTAAACCTTTGGTGGCTTCAATGAAAATGTTTTTCCTTTTTCTCTGCCATTGTTGAGTTGTCTCAAGTCCTTTGATGAAAGGAGAGTTGTGTTGGTCAGTTGAAACATAGAATAATTTCTTGTAATGAATCTCTTAAAATTTGTTTGAGTGAGGGTGTCCTTTGGAAGCAATACCCTACAAATTTGTTATGCTATTCCAAGAAAAGATACAAACTTATATGATCATG

Network for GWHGAAEX002074

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02705.15	K_trans	24	598	2.80E-190

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0071805	Biological Process	potassium ion transmembrane transport
GO:0015079	Molecular Function	potassium ion transmembrane transporter activity
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	29.350
SRP064423	SRR2545915	Juvenile tuber	24.370
SRP108465	SRR5643513	five period of Gastrodia elata	33.700
	SRR5643514	five period of Gastrodia elata	30.500
	SRR5643515	five period of Gastrodia elata	30.500
	SRR5643524	five period of Gastrodia elata	30.470
	SRR5643525	five period of Gastrodia elata	31.120
	SRR5643528	five period of Gastrodia elata	24.700
	SRR5643658	five period of Gastrodia elata	35.370
	SRR5643659	five period of Gastrodia elata	30.120
	SRR5643660	five period of Gastrodia elata	31.970
	SRR5643661	five period of Gastrodia elata	30.000
	SRR5643662	five period of Gastrodia elata	26.880
	SRR5643663	five period of Gastrodia elata	28.410
	SRR5643664	five period of Gastrodia elata	31.830
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	27.430
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	25.380
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	26.440
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	34.780
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	30.570
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	35.410
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	33.220
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	32.970
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	22.610
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	23.830
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	26.940
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	26.940
SRP279888	Gastro	Gastrodia elata tuber	29.94
	Juven	Juvenile tuber	52.06
	Mother_Gastro	Mother tuber of Gastrodia elata	46.63
	Mother_Juven	Mother tuber of Juvenile	52.90