Detail information of GWHGAAEX002075/evm.TU.scaffold_115.103
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG3366 | 2.00E-91 | Mitochondrial F1F0-ATP synthase, subunit d/ATP7 |
| nr | gi|743798876|ref|XP_010925342.1| | 2.57E-101 | PREDICTED: ATP synthase subunit d, mitochondrial-like [Elaeis guineensis] |
| Swissprot | tr|Q9FT52|ATP5H_ARATH | 6.00E-92 | ATP synthase subunit d, mitochondrial |
| trEMBL | tr|B3TLP5|B3TLP5_ELAGV | 1.00E-99 | Mitochondrial F0 ATP synthase D chain {ECO:0000313|EMBL:ACF06476.1} |
| TAIR | AT3G52300 | 2.00E-91 | ATP synthase D chain, mitochondrial |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000116 | 2127974 | 2143598 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002075
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05873.11 | Mt_ATP-synt_D | 13 | 165 | 1.50E-19 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K02138 | ATPeF0D, ATP5H, ATP7 | Metabolic pathways | map01100 |
| Oxidative phosphorylation | map00190 | ||
| Thermogenesis | map04714 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0015986 | Biological Process | ATP synthesis coupled proton transport |
| GO:0015078 | Molecular Function | hydrogen ion transmembrane transporter activity |
| GO:0000276 | Cellular Component | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 110.770 |
| SRR2545915 | Juvenile tuber | 232.820 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 364.700 |
| SRR5643514 | five period of Gastrodia elata | 531.120 | |
| SRR5643515 | five period of Gastrodia elata | 421.590 | |
| SRR5643524 | five period of Gastrodia elata | 533.160 | |
| SRR5643525 | five period of Gastrodia elata | 374.090 | |
| SRR5643528 | five period of Gastrodia elata | 363.020 | |
| SRR5643658 | five period of Gastrodia elata | 377.370 | |
| SRR5643659 | five period of Gastrodia elata | 241.710 | |
| SRR5643660 | five period of Gastrodia elata | 243.860 | |
| SRR5643661 | five period of Gastrodia elata | 243.920 | |
| SRR5643662 | five period of Gastrodia elata | 181.420 | |
| SRR5643663 | five period of Gastrodia elata | 219.290 | |
| SRR5643664 | five period of Gastrodia elata | 205.690 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 295.570 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 410.860 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 352.570 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 247.240 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 266.420 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 253.960 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 236.230 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 281.030 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 372.130 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 310.630 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 436.070 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 436.070 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 189.23 |
| Juven | Juvenile tuber | 206.05 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 174.22 | |
| Mother_Juven | Mother tuber of Juvenile | 162.77 |