Gene detail

Detail information of GWHGAAEX002085/evm.TU.scaffold_115.115

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|158338192\|ref\|YP_001519369.1\|	3.00E-16	hypothetical protein AM1_5085 [Acaryochloris marina MBIC11017]
nr	gi\|672160974\|ref\|XP_008800284.1\|	1.87E-151	PREDICTED: transmembrane protein 64 [Phoenix dactylifera]
Swissprot	tr\|Q8L586\|Y4958_ARATH	2.00E-06	Uncharacterized membrane protein At4g09580
trEMBL	tr\|K4AC22\|K4AC22_SETIT	6.00E-142	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Si036429m}
TAIR	AT1G12450	2.00E-73	SNARE associated Golgi protein family

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000116	2365125	2378308	-

Transcript Sequence
>GWHTAAEX002085 CCAACTTTGAATTCTTGGCTCAACAAACTCTTCCCTTGAGCTTCCCTTGACCTTTTCGCTTCTTCCGCTGCCCACCAACTTATGTTCTTCTTTCCATTGCTTCACAAACTTTTCCTTCTCCTAAGAACGGATTTGAGCTCTTCGTCAATCGATTTCACTATTTTAACACTGCATATTTTGAACTTTAAAGATGATAAGTCTACCTGAGGACTTCAGAAAGAATATTGAAAGTAGTGGGCAACATTCAGAAGAAAATGAATATGCAAGGCTTGTCAAATCCGGCGAGACCAGCGCACATAATAACGATGCCGTGCCAATTCCTGAAACAACAAAGAGCAAATCATTTATGTGGTGGACAAAGGCTATATTCTGCTGCTTGATCCTAATAATACTTTGTCTATTTCTTGCTAAATGGAGTGTTCCTTTTGTTTTTGAGAAGGTTCTTATTCCAATAATGCATTGGGAAGCAACTGCATTTGGGCGGCCGATTCTTGCTCTTATCCTTGTTGCCTCCTTAGCTTTTTTCCCACTAGTTTTCCTTCCCTCTGGCCCGTCCATGTGGCTGGCAGGAATGATTTTTGGTTATGGCCTCGGCTTTATAATAATCATGGTTGGAACCACCATTGGTATGGCTTTGCCTTATTTGCTTGGCTCATTATTCCGGGAGCGTCTCCATGTATGGCTGATGAGATGGCCTAAGGAGGCATCTGTAATACGGTTAGCAGGACAAGGAAGCTGGTTTAAGCAATTTCGAGTTGTGGCAGTCTTCAGAATCTCTCCTTTTCCATACACAATATTCAACTATGGTGTTGTGGTTACTGATATGAGGTTTGGACCTTATCTTTGTGGTTCCATTGTTGGGATGATACCTGAAGCTTTCATCTACATCTATAGCGGGCGGTTGATTCGAACTCTGGCTGACATGAAATATGGAAGCTATAGGATGACACCTCTGGAGATAGCTTACAATGTATTTTCCTTTGTAATTGCTGTTATCTTAACTGTTGCCTTCACCATTTATGCAAGAAGGGTTCTCAATGAACTTAAGCGTACTGAAGGTGCCGATGGGAAGGAACATATTGAAACTGAGATGAAACCACAAGAAAAACAGAGGACATATTCATTTCCTCTTGATGATTTTACTACTCCACCGGTATGATGCTTAATTGACAGATAGTTAATTGTACAGATGAAGATACTATTGTGTTGAAATGCAATGATAGGATACCATAAATACTGTATGATTTCTTAGCCAATTTTGACTTTGTAGAAAAATCCGAGCAGAGAAATAGAATGTTCTTATGGACAAGCTTAAGTGACTCAATGATTCTAGTTAAAATGTTGTATTGACCCAATGCAAGACTCTCGACATTGAGCCTATGGCAATAATCAGAATAGCTGCAGAAATTATTTTATTTATGTTCGTGAGCTGTGACTATTAGTAAAGATTATGCTTGGTTTTCTAAGGAAATTAATAAATCTTTTTAATTGTTAAAAAAATGTGATTCTTTAATGTTCGCATCTAAAAAATTTAGGCATACATTGTTCTTAGTTCATGAACATTTAGAGCATGATTATGCTCATTTATGAAAATGTATTTGCTCACATGTTCATTTATGGTGTTATTTTTGGTTGCTAAGAAAATTGCCTTCAAACAGAAGCAAAACCATTTGTTTAATTAAGGTATCATTTAAGCTTGTTTAATAGCTCATTTATTAGCCCACTTAAACGATTATTAGTGAGCTCAGATCAAGCTTGATAAAAGCTTTATGATCAGCTTGATAGTGATATACAACATATACGAATAACACACGAGCCAAGCTCAAATCACGTTTGAATATGACAATAAAAACTAACCGTTAACACTTCACCCAATACTTTAATTGAGGTTGAAACGAGCTTGAAATGCGTTGTCATAGACGAGCACAAGCTTGAACACATGCAAGCTTGGCTTGACTCGGTTCATTTGCAACCCTAATTTTGGGGTAGCATAGCATTCATTCTTAATTTATTTCTACCACACTATTTCATGCTACAAGTAGAGATTTGTAGTGCACTCAAGTATAAAAAATAACTGGTACCATGTACATTCGTGCAAGTTTTAATAATTCTCTCTTCAACATTTTAGTCTTTTTTATGCATCCAAGTGTGCATTTTTGACATGATTAATATATCATAACATTTTATATTTGGTGGCTATTAGTTAAGATCTTTTGAAAAATATTACTATTTTTAATTATTTTATATCAATCATGTATATGAATTCATACACAAATTCTTCTTTGTATTATGAGCAATTTTTGTTGATGATCTTCGTTCTCCATATTGTCCATGAAACATTGGCATTGCTCTTATATCTCAATAGCTTATTGGAGAAAGTTGTTCCGCTTAAAGCTAGGCAATTATGGAAGCAATCGCTGGAGTCTTTCCCTGCTGTTGCTGTCTTGCAATTTTCTTTATGATTTGCGAACTCTTATCATAGTGTTGAATAATGCCGTAATGTTTTTTATTTTGTTTTTTTGTGATGTGTGGAAGCAACGAGGTGGACTCTTTGGTTTTTTTGTGATGTCAGGCAGGTTATATGGTTTTCATTATTTTTTATGATTGTATGTTGTGTTCTTCTGATTTTTGTTATGATTCAATTTTCATTCTACTTTGATTTCATCATGATTCTGATTTTGGGAGCTATTTTTTATAAATTTGTTATTAGTTTTGGCTTATTGTCGGGGGTGTGGATGTTTCAGTGCCTTATGCTCTGATGAATATCTCTCAATGCTTGATTACATACACATTCTAGACACAGTTTGGAAGATTAAGTTGAAAAAAGGAAGAATTATGAGTAATTCCAACATGTTTTAGGTTTGCAGGTTTGGAGGCCTCTGACATTATTATACCATCTGAATGCATACTTAGATTAAAAATTTTCTTCTAAAGTTTTTTATTTTATTAATGTTAGTATTATACCATTTGAATGCTATACTTGGGCATCAGCCTCCAGAAATGCATACTTTGATTATAAGATTTTATGAGACTATAATATTAACATCTTGCAAACATGAAATATCCTATTGTAGATTGATAAATGTGGTTAAAAACTTGAGAAGGGTTGGATCTATACCTCACAGTACAGAATTGAATAAGAGGAGATAAATATGAACCATGACTTTTGAATCTCTACTTGATATTAGTCCATTTAAGAATGGTGGGGAAAGACCTGCATTAAAGAAAGATGCAGAAAAACTCATCAAGGTTTAAAAGTTTAAGGGGGAGATAATACAAAGTCAGAATGATATTTGAGTCAAATATATTCTATTTTATAAACATTTAATTATCACATACTTTATGATATATCTCACAATTCATAGTATTCTCTTTTATTCTTATTTTTATGTGATAAATATGTATATGAAACAAAATATGTGTATTTCTAAAGTTATCATCTTAATTTTTTTTTTACAAGACTAACAAATAATTATACTTTCTTCTATTTTGAATGTTAAATATGTAATTGAGACAAGTTAGCAGAGTATGTATGAATTTTTCCCATTATTTATGCTGCATGATAAATCAACTGCTTTTGACTACTATGCTTTAATTAGGCAAACATTGGAGCAGCTTGCTTTTGTTTTGAGAATGTTCAGACAAACGTGATCAACTGTTACCTACCAACTTAATTTAATGGTTATTTGGGGGCAATGTCATATTGAAATTAATCTCAATTATATATATA

Network for GWHGAAEX002085

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF09335.10	SNARE_assoc	118	237	1.10E-17

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.700
SRP064423	SRR2545915	Juvenile tuber	8.210
SRP108465	SRR5643513	five period of Gastrodia elata	8.560
	SRR5643514	five period of Gastrodia elata	10.350
	SRR5643515	five period of Gastrodia elata	15.230
	SRR5643524	five period of Gastrodia elata	12.070
	SRR5643525	five period of Gastrodia elata	14.980
	SRR5643528	five period of Gastrodia elata	20.910
	SRR5643658	five period of Gastrodia elata	14.090
	SRR5643659	five period of Gastrodia elata	8.640
	SRR5643660	five period of Gastrodia elata	6.670
	SRR5643661	five period of Gastrodia elata	8.320
	SRR5643662	five period of Gastrodia elata	9.170
	SRR5643663	five period of Gastrodia elata	8.400
	SRR5643664	five period of Gastrodia elata	6.900
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.810
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.740
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.440
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.140
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	10.760
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	13.340
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.590
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	10.250
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.380
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.150
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.000
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.000
SRP279888	Gastro	Gastrodia elata tuber	7.31
	Juven	Juvenile tuber	13.90
	Mother_Gastro	Mother tuber of Gastrodia elata	53.12
	Mother_Juven	Mother tuber of Juvenile	127.24