Gene detail

Detail information of GWHGAAEX002088/evm.TU.scaffold_115.118

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|573949647\|ref\|XP_006657121.1\|	2.33E-100	PREDICTED: uncharacterized protein LOC102715492 [Oryza brachyantha]
trEMBL	tr\|J3MFP8\|J3MFP8_ORYBR	7.00E-100	Uncharacterized protein {ECO:0000313\|EnsemblPlants:OB06G28420.1}

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000116	2459166	2463435	-

Transcript Sequence
>GWHTAAEX002088 ATGTCGCCTGAGGCTGAAGAGCAGCAGAGTGCCGCCGAGCTGGAAGACGACCATTTAACCAGGCGGAAGGAAGGTGAAGATCAGCGGAGTGGTGGCGAACTGGAGGAGGATTCTTACACTAAGAGGAAGAGATTAAGGCGAGTAAGCTTCGCAGAGACCACTATCCACGTCTTTACCCGTGACGATGAGTCTGAGAGCCCGGCGGAGTCAAACCCTGGCCAAGACTCCCGATTTTCGGACTCTGACCCCGATGACGATAAGGAGAATGTCGCGCTATTTAAGTTTGGAAGGGGCATCGATTCATCATCCCCTGCTGATTCTGTCACATCTAATGAGGATGACAATTTCTTTGGTCCTGTATCGACGAGCTTTATCAGCTCTGGTCGACCGAGTGACTCTGGAATGTCCGAGGACATCAATCATGACATCACATTGGATTCGACCGCCTTCTCTTTGCATTTCAGGAATCTGATTCCTCCACATGACCATTTGACAAATTCAGCCGGAAGTCTGAGGACTCCAACAGTAGATACTCCTCTGGGCTTGAGTTATGGAAGTGAGCAAACTGGGGAACCGACAAGTTCTGTTGGGCAAATTAACAATGTCTCTGGAGATTTGAACAATTTTAGTCCGATTGCAGGAAGATCTCACAGCTATGATTATGGGAAACTTTCTGACACACTGGACGCACTCATGAATCAAGTAAAACTGAGAATGAAAAAGATTTCCCCTAAGATAGATTCTAGATTTTCAACTTCTTGTTGCATATCTGATGAAGTTGGAAGCCTTGGACAATTGAGCAAGGATGGAAAAGGGGTTGGTATTAAAAGTTCTGTTTGTGAGGAACCTAACCGTTATTTTCACTGCCCAGTCGTTTTAATGAGTCCTCCAACAAACAATGAATCCTTGTTTCATGCAAAAACTAAAGCATTGGAAACTCAAACGAATAAAGAGAACATGCAGAAAATGCTTTCTCATGCCTCTGTTGATAGCCTTGGGAAAGGTCATGAGGCAGTTCATCCTGAATCTATGGTTGCCAATGGTCGGAATTCTAAGCTGCTATCTCCCTCGCATGGAGAAGTGCAGGATGATTTGAATGAAGAAGCTTGCCATATTCACAAACAGCCACTTAGAAGTACAACTAGTGAAGGCAATAGCTATTCTAATTTGCACCTCCACTCTATTTCATCTGTTCCATCGACATCCAAGAACGTTGAACAGAAGTTGGAGTCGACAGACACAGTACATACCCCTGAGAATGTTATTAAGTCATTGTATTCATCTTTCATCCAAGAACTAACTCCATTTTCGTGCAACCAGCAGAAAGAGCACTTTCTTAGTCAGACTAATCCATCTTCAAGTAAAATTTTATCAATTGCAGACTGGGAAAAAGTTGATTCTTATATGAAAAAACCTGATAATGCTGTAAAAATATTTCAGCCTTCATCATTATTGAAGGGGTCTGCATCCCGTTTCCCTCACAAACTAGGTTCTTCTGCTCATTCCCTTGATGTGGCTGGACTGAAAAGGGTGCCCGTTGAGCATGGGAATAGAATTTCTGCAGTTGAAAATTCTGCGTTTGATGGAAATATCAGTCATACTGCTCTGGACAACAGGAACAACAATATGAAGACCCCTGACACTGCGATTAAGCAATTTTCTGCATTAAATGCCTCCTTATCCTCTCTTCAGGACAAAATGAGGCAGCCTCTCAATCCTCCTGATCCTTCCCAGAGGCAATCACTTCTCAATTCTGTTAGGGAGCTCTCTGCTTCTCTGAAAATGGAGCTCAAAGGGCACGAAGAAACAATCTCCGCCATTAAAACCAACTTGAGCAGATCTAGGCTCAAACCCAAAACGGACCTTGATCGCGAATCCCCAGCGTCGAAGAAGGATACTTCTTTGATTGCTAGTCTTCAGTCTATTTCGAACGAAGGTAATGATGCAGCCAACCAGCTGCTGCCACAATCAATATCCGAGCTGAATCTACAAGGGCTCAGTAAAGCCGAAGATTTACTGGCTGAGTTTGAAACTGCAAGGAAATATGAGGAGCTCTTTATGACCCTGAGAAATCCAAATTGCTTTGTTGATTCCCGCCAAAAAAGTATCATGGCCGCAAGATCTTTGCTGGGAAAGCTCGGGGTCGCTAAAGCGAGAAACCAGTTGAAGCGCATGAAGCTAGCCAAACTGCACGAAAGAGCTCAGACCCTGCACTCCCGGACGGACGAGTGCAGACAACTGAAGTCAATCTTTGCTCATCTTCTGCTCGCAAAAGCTGCCGAGCCGGACGAGTCATCGGATCGCACGCAGCATCAGGCAGAACATAGTGGATTGCCGGCGATGAAGCGAGAGCTCGAAATTCTCGAACAGAAGATTAAACTTCTGTCAGAATCACTGTGGGCTTCCTGTGGGCTAAAATCAGGGAAACCGAGCTGTGATGCCGCCATTAAAGCGGCTGAGGAGCTCGTGATGAGGAGAGCAGTCTGCAGGGAGATTCAGCAGCAGGCACGGCTATGGAGACTAAGCGATGTGGTCACGAAGAACAACGGCTACGAGATCGTCCTCAACTGCTGCGATCTGCTCTTTCAGAGGTTTACGATAAGCAGATTTCGTGGTCATGAAAGCTTGGCAGAGAACACCTCCTCCAACGCTTCGTATATTGCGCGGAGGTATCCGCACATGAATGCGCGCGCGGCCTTCGAGTTCGTGTTTGAGCTGGACGCCGATCGCAGCAGGTTGGTGAATTCGAACGGCCTCTGCGAGAGAACTGTGGAGACTGATCTCCGTTTGGGAACGCTGATGGACGTCATGGACGAGATTCTGCGGTCGCGTTTGGAGTTGCCAAACCTGATGGAATGCGCCTTTGAGAGGCCGCCTTCGGGAGAGCTTGAGCTTCGGCTGTGCTTCTACGGCTTCGCCGGAGGCAGGAAGCTCAGCCTGGGCGTCGACGTGGCTGTTCTGAGCTGCGGGATGTATCCCTCCGACCCGTCGGAGCTGAGGGTGCAAGTTTGCCAGCAGCACACGACGGTGCCGTTGGATGCTGCAGATCAAATCATCGGGGCTGTTCACAGCTTGGATCGCGGCCACCTCGTCATCCTAAGGTTGTGCCGGTGCGTTTCTCAGGCTGTTCAGTCTTGCGGTCGGACATAG

Network for GWHGAAEX002088

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX002088
MSPEAEEQQSAAELEDDHLTRRKEGEDQRSGGELEEDSYTKRKRLRRVSFAETTIHVFTRDDESESPAESNPGQDSRFSDSDPDDDKENVALFKFGRGIDSSSPADSVTSNEDDNFFGPVSTSFISSGRPSDSGMSEDINHDITLDSTAFSLHFRNLIPPHDHLTNSAGSLRTPTVDTPLGLSYGSEQTGEPTSSVGQINNVSGDLNNFSPIAGRSHSYDYGKLSDTLDALMNQVKLRMKKISPKIDSRFSTSCCISDEVGSLGQLSKDGKGVGIKSSVCEEPNRYFHCPVVLMSPPTNNESLFHAKTKALETQTNKENMQKMLSHASVDSLGKGHEAVHPESMVANGRNSKLLSPSHGEVQDDLNEEACHIHKQPLRSTTSEGNSYSNLHLHSISSVPSTSKNVEQKLESTDTVHTPENVIKSLYSSFIQELTPFSCNQQKEHFLSQTNPSSSKILSIADWEKVDSYMKKPDNAVKIFQPSSLLKGSASRFPHKLGSSAHSLDVAGLKRVPVEHGNRISAVENSAFDGNISHTALDNRNNNMKTPDTAIKQFSALNASLSSLQDKMRQPLNPPDPSQRQSLLNSVRELSASLKMELKGHEETISAIKTNLSRSRLKPKTDLDRESPASKKDTSLIASLQSISNEGNDAANQLLPQSISELNLQGLSKAEDLLAEFETARKYEELFMTLRNPNCFVDSRQKSIMAARSLLGKLGVAKARNQLKRMKLAKLHERAQTLHSRTDECRQLKSIFAHLLLAKAAEPDESSDRTQHQAEHSGLPAMKRELEILEQKIKLLSESLWASCGLKSGKPSCDAAIKAAEELVMRRAVCREIQQQARLWRLSDVVTKNNGYEIVLNCCDLLFQRFTISRFRGHESLAENTSSNASYIARRYPHMNARAAFEFVFELDADRSRLVNSNGLCERTVETDLRLGTLMDVMDEILRSRLELPNLMECAFERPPSGELELRLCFYGFAGGRKLSLGVDVAVLSCGMYPSDPSELRVQVCQQHTTVPLDAADQIIGAVHSLDRGHLVILRLCRCVSQAVQSCGRT

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.160
SRP064423	SRR2545915	Juvenile tuber	5.890
SRP108465	SRR5643513	five period of Gastrodia elata	4.020
	SRR5643514	five period of Gastrodia elata	3.780
	SRR5643515	five period of Gastrodia elata	2.720
	SRR5643524	five period of Gastrodia elata	3.880
	SRR5643525	five period of Gastrodia elata	2.360
	SRR5643528	five period of Gastrodia elata	1.810
	SRR5643658	five period of Gastrodia elata	1.850
	SRR5643659	five period of Gastrodia elata	3.350
	SRR5643660	five period of Gastrodia elata	3.390
	SRR5643661	five period of Gastrodia elata	2.040
	SRR5643662	five period of Gastrodia elata	2.460
	SRR5643663	five period of Gastrodia elata	2.640
	SRR5643664	five period of Gastrodia elata	1.900
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.530
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.840
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.340
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.050
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.690
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.340
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.930
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.250
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.200
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.770
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.210
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.210
SRP279888	Gastro	Gastrodia elata tuber	2.15
	Juven	Juvenile tuber	3.17
	Mother_Gastro	Mother tuber of Gastrodia elata	1.33
	Mother_Juven	Mother tuber of Juvenile	1.96